Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL13Q99616 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL13Q99616 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL13Q99616 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL13Q99616 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL13Q99616 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL13Q99616 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL13Q99616 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL13Q99616 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 AC079178.1-201ENST00000420915 656 ntBASIC12.34□□□□□ -0.43
CCL13Q99616 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL13Q99616 Z93015.1-201ENST00000451718 390 ntBASIC12.34□□□□□ -0.43
CCL13Q99616 RPL13AP20-201ENST00000459725 609 ntBASIC12.34□□□□□ -0.43
CCL13Q99616 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL13Q99616 ALG3P1-201ENST00000508806 1114 ntBASIC12.34□□□□□ -0.43
CCL13Q99616 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.34□□□□□ -0.43
CCL13Q99616 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL13Q99616 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
CCL13Q99616 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.34□□□□□ -0.43
CCL13Q99616 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 AC244157.2-201ENST00000616239 1006 ntBASIC12.34□□□□□ -0.43
CCL13Q99616 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL13Q99616 AGGF1P1-201ENST00000509500 2073 ntBASIC12.34□□□□□ -0.43
CCL13Q99616 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL13Q99616 SHC1P1-201ENST00000425230 1745 ntBASIC12.34□□□□□ -0.43
CCL13Q99616 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL13Q99616 AC006504.5-208ENST00000588784 2401 ntBASIC12.33□□□□□ -0.43
CCL13Q99616 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
CCL13Q99616 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL13Q99616 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL13Q99616 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CCL13Q99616 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 AP001267.2-201ENST00000532619 2086 ntBASIC12.33□□□□□ -0.44
CCL13Q99616 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCL13Q99616 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCL13Q99616 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.33□□□□□ -0.44
CCL13Q99616 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCL13Q99616 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL13Q99616 AC244107.1-201ENST00000442033 332 ntBASIC12.33□□□□□ -0.44
CCL13Q99616 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.33□□□□□ -0.44
CCL13Q99616 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL13Q99616 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL13Q99616 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL13Q99616 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms