Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EYA3Q99504 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
EYA3Q99504 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
EYA3Q99504 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EYA3Q99504 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
EYA3Q99504 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.67■□□□□ 0.42
EYA3Q99504 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EYA3Q99504 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EYA3Q99504 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.67■□□□□ 0.42
EYA3Q99504 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.66■□□□□ 0.42
EYA3Q99504 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
EYA3Q99504 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.66■□□□□ 0.42
EYA3Q99504 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.66■□□□□ 0.42
EYA3Q99504 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 AC092580.1-201ENST00000433998 658 ntBASIC17.66■□□□□ 0.42
EYA3Q99504 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.66■□□□□ 0.42
EYA3Q99504 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.66■□□□□ 0.42
EYA3Q99504 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.66■□□□□ 0.42
EYA3Q99504 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.66■□□□□ 0.42
EYA3Q99504 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.66■□□□□ 0.42
EYA3Q99504 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.66■□□□□ 0.42
EYA3Q99504 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.66■□□□□ 0.42
EYA3Q99504 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 MIR6756-201ENST00000616240 63 ntBASIC17.66■□□□□ 0.42
EYA3Q99504 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
EYA3Q99504 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.66■□□□□ 0.42
EYA3Q99504 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 TEKT4P2-202ENST00000559466 1312 ntBASIC17.66■□□□□ 0.42
EYA3Q99504 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.66■□□□□ 0.42
EYA3Q99504 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.66■□□□□ 0.42
EYA3Q99504 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.66■□□□□ 0.42
EYA3Q99504 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EYA3Q99504 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
EYA3Q99504 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
EYA3Q99504 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
EYA3Q99504 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 ERP29P1-201ENST00000442902 706 ntBASIC17.65■□□□□ 0.42
EYA3Q99504 KRT18P66-201ENST00000452970 1269 ntBASIC17.65■□□□□ 0.42
EYA3Q99504 DPY19L2P5-201ENST00000456300 331 ntBASIC17.65■□□□□ 0.42
EYA3Q99504 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
EYA3Q99504 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.65■□□□□ 0.42
EYA3Q99504 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.65■□□□□ 0.42
EYA3Q99504 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EYA3Q99504 ALG1L6P-201ENST00000515248 758 ntBASIC17.65■□□□□ 0.42
EYA3Q99504 RNA5SP417-201ENST00000516459 108 ntBASIC17.65■□□□□ 0.42
EYA3Q99504 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.65■□□□□ 0.42
EYA3Q99504 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 AC021016.3-201ENST00000608367 477 ntBASIC17.65■□□□□ 0.42
EYA3Q99504 AC090386.2-201ENST00000623010 1039 ntBASIC17.65■□□□□ 0.42
EYA3Q99504 AC127024.7-201ENST00000625101 200 ntBASIC17.65■□□□□ 0.42
EYA3Q99504 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.65■□□□□ 0.42
EYA3Q99504 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EYA3Q99504 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EYA3Q99504 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms