Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 AL391647.1-201ENST00000395664 511 ntBASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 FO393414.2-201ENST00000405153 598 ntBASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 TARDBPP1-201ENST00000442013 1203 ntBASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SLED1-202ENST00000512051 380 ntBASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 AC009474.1-201ENST00000455096 1565 ntBASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 KRT8P35-201ENST00000483942 1338 ntBASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AP002414.3-201ENST00000589352 1468 ntBASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 RPS2P28-201ENST00000314255 741 ntBASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AC096734.2-201ENST00000562054 433 ntBASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB3IPQ96QF0 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.4□□□□□ -0.11
RAB3IPQ96QF0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.4□□□□□ -0.11
RAB3IPQ96QF0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms