Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 TUBB8P4-201ENST00000511806 1324 ntBASIC10.68□□□□□ -0.7
C9orf85Q96MD7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 UGT1A2P-201ENST00000454886 866 ntBASIC10.68□□□□□ -0.7
C9orf85Q96MD7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 SERBP1P5-201ENST00000510079 1181 ntBASIC10.68□□□□□ -0.7
C9orf85Q96MD7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 CHCHD2P3-201ENST00000603038 451 ntBASIC10.68□□□□□ -0.7
C9orf85Q96MD7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 AC007541.1-201ENST00000570282 1469 ntBASIC10.68□□□□□ -0.7
C9orf85Q96MD7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
C9orf85Q96MD7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 AC130686.1-201ENST00000622936 2466 ntBASIC10.67□□□□□ -0.7
C9orf85Q96MD7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 FKBP4P6-201ENST00000457486 1332 ntBASIC10.67□□□□□ -0.7
C9orf85Q96MD7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 PUDPP3-201ENST00000445368 636 ntBASIC10.67□□□□□ -0.7
C9orf85Q96MD7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 FTLP10-202ENST00000505798 471 ntBASIC10.67□□□□□ -0.7
C9orf85Q96MD7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 ENPP7P14-201ENST00000621765 1040 ntBASIC10.67□□□□□ -0.7
C9orf85Q96MD7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
C9orf85Q96MD7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms