Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC073130.3-201ENST00000624389 2278 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 PCDHB19P-201ENST00000570871 2371 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 LINC02521-201ENST00000440848 834 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AL132994.1-201ENST00000554098 400 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 GPSM3-210ENST00000619085 1177 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MEP1AP1-201ENST00000636082 1097 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 HMGN1P4-201ENST00000419500 290 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 PFN1P10-201ENST00000455962 327 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MYCT1-202ENST00000529453 724 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CD63-212ENST00000552067 621 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RN7SL750P-201ENST00000582814 238 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC007450.4-201ENST00000614709 524 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC010086.2-201ENST00000428616 226 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AL512310.5-201ENST00000551999 515 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC123912.6-201ENST00000612657 315 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SNORA9B-201ENST00000384170 133 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 RN7SL646P-201ENST00000492969 297 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 RPL18P1-201ENST00000497218 552 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC090825.2-201ENST00000557959 739 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC005086.1-201ENST00000566572 801 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ADGRG5-207ENST00000615867 762 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 Z98885.3-201ENST00000624882 1757 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms