Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AL512310.5-201ENST00000551999 515 ntBASIC13.12□□□□□ -0.31
RNF138Q8WVD3 ACTG1P17-201ENST00000558391 1119 ntBASIC13.12□□□□□ -0.31
RNF138Q8WVD3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 AC027601.5-201ENST00000624065 2482 ntBASIC13.12□□□□□ -0.31
RNF138Q8WVD3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RNF138Q8WVD3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AC007686.3-201ENST00000619017 3487 ntBASIC13.11□□□□□ -0.31
RNF138Q8WVD3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AC008132.1-202ENST00000342005 1389 ntBASIC13.11□□□□□ -0.31
RNF138Q8WVD3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 RNA5SP359-201ENST00000364838 113 ntBASIC13.11□□□□□ -0.31
RNF138Q8WVD3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AC103592.1-201ENST00000394513 664 ntBASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AC116345.2-201ENST00000512837 523 ntBASIC13.11□□□□□ -0.31
RNF138Q8WVD3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AC024681.1-201ENST00000521917 487 ntBASIC13.11□□□□□ -0.31
RNF138Q8WVD3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF138Q8WVD3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 AC090643.2-201ENST00000623442 2029 ntBASIC13.1□□□□□ -0.31
RNF138Q8WVD3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 CICP16-201ENST00000502609 2813 ntBASIC13.1□□□□□ -0.31
RNF138Q8WVD3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms