Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 PES1P2-201ENST00000449745 1735 ntBASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 OR7E155P-201ENST00000412208 1014 ntBASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 BX088651.3-201ENST00000418155 352 ntBASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 MYL6-215ENST00000549566 685 ntTSL 2 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 AL512310.5-201ENST00000551999 515 ntBASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 MEP1AP1-201ENST00000636082 1097 ntBASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 AL365203.3-201ENST00000609742 2057 ntBASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 DOC2GP-204ENST00000639052 2548 ntBASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 DNM1P46-202ENST00000415963 882 ntBASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 RNA5SP288-201ENST00000516075 93 ntBASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL22A1Q8NFW1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 CDKN2A-AS1-201ENST00000441769 823 ntBASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 MYADML-201ENST00000474610 2147 ntBASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 AC008620.2-201ENST00000510294 1569 ntBASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 AC103702.1-201ENST00000548801 2630 ntBASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 MIR1226-201ENST00000408658 75 ntBASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 MIR5091-201ENST00000578707 93 ntBASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 RN7SL300P-201ENST00000582522 318 ntBASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 Z82244.2-201ENST00000632196 448 ntBASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC18.78■□□□□ 0.6
COL22A1Q8NFW1 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms