Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 CICP1-201ENST00000416803 2410 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AC125807.2-201ENST00000513358 3514 ntBASIC11.04□□□□□ -0.64
NUP35Q8NFH5 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NUP35Q8NFH5 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 KRT8P12-202ENST00000472924 1397 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AC136604.1-202ENST00000425471 771 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 HLA-K-203ENST00000430151 1046 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AL121912.1-201ENST00000603683 238 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 MIR7706-201ENST00000613747 67 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AF228730.6-201ENST00000641497 218 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AC084121.3-201ENST00000641716 218 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AC024075.2-201ENST00000598112 1473 ntBASIC11.03□□□□□ -0.64
NUP35Q8NFH5 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NUP35Q8NFH5 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NUP35Q8NFH5 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NUP35Q8NFH5 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NUP35Q8NFH5 VENTXP1-201ENST00000569334 2716 ntBASIC11.02□□□□□ -0.64
NUP35Q8NFH5 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NUP35Q8NFH5 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
NUP35Q8NFH5 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NUP35Q8NFH5 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.02□□□□□ -0.64
NUP35Q8NFH5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NUP35Q8NFH5 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms