Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AC092053.3-201ENST00000641308 4975 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 FAM90A2P-201ENST00000511144 1395 ntBASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 FAM90A25P-201ENST00000528404 1395 ntBASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 AC138035.3-201ENST00000622706 2791 ntBASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 LINC00554-201ENST00000564841 3011 ntBASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 AC010141.1-201ENST00000411585 623 ntBASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 AC097065.1-201ENST00000425737 517 ntBASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 AC006058.4-201ENST00000624016 1670 ntBASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF248Q8NDW4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.08□□□□□ -0.15
ZNF248Q8NDW4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.08□□□□□ -0.15
ZNF248Q8NDW4 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
ZNF248Q8NDW4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF248Q8NDW4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.08□□□□□ -0.15
ZNF248Q8NDW4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF248Q8NDW4 E2F3P2-201ENST00000447755 1422 ntBASIC14.08□□□□□ -0.15
ZNF248Q8NDW4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AC006486.2-201ENST00000624246 2199 ntBASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AL157792.1-201ENST00000488281 530 ntBASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 RN7SL67P-201ENST00000492147 296 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms