Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CSPG4P11-201ENST00000560634 4910 ntBASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 SALL4P5-201ENST00000419001 1760 ntBASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 INTS4P1-203ENST00000641008 3683 ntBASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AP006294.1-201ENST00000415407 339 ntBASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AC068587.3-201ENST00000526613 355 ntBASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 PTP4A1P2-201ENST00000546033 454 ntBASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AC092364.2-202ENST00000597012 1073 ntBASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AC134312.5-201ENST00000568031 1313 ntBASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AL138709.1-201ENST00000614840 1693 ntBASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF439Q8NDP4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 AC073957.3-201ENST00000609998 6758 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 RN7SKP230-201ENST00000365642 335 ntBASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF439Q8NDP4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms