Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 CYP46A4P-201ENST00000414953 267 ntBASIC17.43■□□□□ 0.38
CTR9Q6PD62 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 SPTLC1P5-201ENST00000450718 252 ntBASIC17.43■□□□□ 0.38
CTR9Q6PD62 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 AC006122.1-201ENST00000493323 440 ntBASIC17.43■□□□□ 0.38
CTR9Q6PD62 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 AC009779.1-201ENST00000551138 283 ntBASIC17.43■□□□□ 0.38
CTR9Q6PD62 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 AL132994.2-201ENST00000603120 687 ntBASIC17.43■□□□□ 0.38
CTR9Q6PD62 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 AC009093.10-201ENST00000641956 1442 ntBASIC17.43■□□□□ 0.38
CTR9Q6PD62 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTR9Q6PD62 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CTR9Q6PD62 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 RN7SL774P-201ENST00000577467 290 ntBASIC17.42■□□□□ 0.38
CTR9Q6PD62 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 AL136295.7-201ENST00000619226 1200 ntBASIC17.42■□□□□ 0.38
CTR9Q6PD62 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.42■□□□□ 0.38
CTR9Q6PD62 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTR9Q6PD62 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 SNX18-202ENST00000343017 3140 ntBASIC17.41■□□□□ 0.38
CTR9Q6PD62 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTR9Q6PD62 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.41■□□□□ 0.38
CTR9Q6PD62 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.41■□□□□ 0.38
CTR9Q6PD62 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms