Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 TPM3P8-201ENST00000330554 643 ntBASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 PIN1P1-201ENST00000412108 996 ntBASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 AP001889.1-201ENST00000525414 633 ntBASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 TDH-203ENST00000531764 1110 ntBASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 MIR4683-201ENST00000579659 81 ntBASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 AC010319.3-201ENST00000597028 470 ntBASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.02■□□□□ 0.16
CDKAL1Q5VV42 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKAL1Q5VV42 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 AC068760.1-201ENST00000493579 1953 ntBASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 AC236430.1-201ENST00000402231 743 ntBASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 CICP12-201ENST00000455801 843 ntBASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 AC002472.3-201ENST00000640124 621 ntBASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKAL1Q5VV42 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDKAL1Q5VV42 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDKAL1Q5VV42 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDKAL1Q5VV42 DGCR9-201ENST00000609630 2415 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms