Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AC073869.4-201ENST00000620841 800 ntBASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 RPL3P5-201ENST00000441645 1232 ntBASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AC133141.1-201ENST00000443015 339 ntBASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 APOC1-209ENST00000592885 562 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AC233280.19-201ENST00000633223 136 ntBASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 Z98885.3-201ENST00000624882 1757 ntBASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 TCAF2P1-201ENST00000291129 2421 ntBASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AHCYP3-201ENST00000420053 1279 ntBASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AC006328.1-201ENST00000437571 379 ntBASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
VPS13DQ5THJ4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AC104961.1-201ENST00000427605 771 ntBASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 IGHEP2-201ENST00000519308 1256 ntBASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AC068831.5-201ENST00000557387 328 ntBASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AC026120.2-201ENST00000617239 309 ntBASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
VPS13DQ5THJ4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms