Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 KLF2P1-201ENST00000447438 1042 ntBASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 HSPA8P5-201ENST00000456928 2069 ntBASIC15.44■□□□□ 0.06
PTPN20Q4JDL3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 GK-202ENST00000378941 458 ntTSL 3 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 AL354877.1-201ENST00000424412 413 ntBASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 AL157407.1-201ENST00000435784 904 ntBASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 RNA5SP412-201ENST00000516234 123 ntBASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 AC010328.2-201ENST00000597698 1111 ntBASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 AC015818.8-201ENST00000587907 1519 ntBASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTPN20Q4JDL3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 FAM21FP-201ENST00000426241 1131 ntBASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 HSPB1P2-201ENST00000448722 546 ntBASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 MIR6720-201ENST00000611664 98 ntBASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 AL162426.1-201ENST00000624141 743 ntBASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN20Q4JDL3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms