Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 Z97180.1-201ENST00000445173 988 ntBASIC17.6■□□□□ 0.41
RFX7Q2KHR2 AC006335.1-201ENST00000445200 547 ntBASIC17.6■□□□□ 0.41
RFX7Q2KHR2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 AC018635.2-201ENST00000608625 364 ntBASIC17.6■□□□□ 0.41
RFX7Q2KHR2 AC133540.1-201ENST00000620845 1019 ntBASIC17.6■□□□□ 0.41
RFX7Q2KHR2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 TUBB8P4-201ENST00000511806 1324 ntBASIC17.6■□□□□ 0.41
RFX7Q2KHR2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RFX7Q2KHR2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 AC234782.1-201ENST00000451950 919 ntBASIC17.59■□□□□ 0.41
RFX7Q2KHR2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 AL009178.2-201ENST00000597278 2719 ntBASIC17.59■□□□□ 0.41
RFX7Q2KHR2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX7Q2KHR2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX7Q2KHR2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.58■□□□□ 0.41
RFX7Q2KHR2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFX7Q2KHR2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX7Q2KHR2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
RFX7Q2KHR2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 MIR4722-201ENST00000578292 60 ntBASIC17.58■□□□□ 0.4
RFX7Q2KHR2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.58■□□□□ 0.4
RFX7Q2KHR2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFX7Q2KHR2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.57■□□□□ 0.4
RFX7Q2KHR2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms