Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 VDAC1P7-201ENST00000462417 847 ntBASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AC004890.2-204ENST00000481968 304 ntBASIC11.37□□□□□ -0.59
HIST1H1AQ02539 RPL13AP25-201ENST00000484130 612 ntBASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 RARRES2P5-201ENST00000564013 466 ntBASIC11.37□□□□□ -0.59
HIST1H1AQ02539 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AC011474.4-201ENST00000623523 2076 ntBASIC11.37□□□□□ -0.59
HIST1H1AQ02539 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AC015909.5-201ENST00000624336 2266 ntBASIC11.37□□□□□ -0.59
HIST1H1AQ02539 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AC055811.4-201ENST00000624039 1754 ntBASIC11.36□□□□□ -0.59
HIST1H1AQ02539 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 SPDYE19P-201ENST00000338590 713 ntBASIC11.36□□□□□ -0.59
HIST1H1AQ02539 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 AL390955.2-201ENST00000603032 514 ntBASIC11.36□□□□□ -0.59
HIST1H1AQ02539 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.36□□□□□ -0.59
HIST1H1AQ02539 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.36□□□□□ -0.59
HIST1H1AQ02539 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.36□□□□□ -0.59
HIST1H1AQ02539 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.36□□□□□ -0.59
HIST1H1AQ02539 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
HIST1H1AQ02539 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms