Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.91□□□□□ -0.18
RAE1P78406 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.91□□□□□ -0.18
RAE1P78406 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 KRT43P-201ENST00000434019 910 ntBASIC13.91□□□□□ -0.18
RAE1P78406 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RAE1P78406 RPL7P3-201ENST00000441388 714 ntBASIC13.91□□□□□ -0.18
RAE1P78406 CNN2P10-201ENST00000443067 918 ntBASIC13.91□□□□□ -0.18
RAE1P78406 AL035414.1-201ENST00000451327 857 ntBASIC13.91□□□□□ -0.18
RAE1P78406 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RAE1P78406 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.91□□□□□ -0.18
RAE1P78406 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.91□□□□□ -0.18
RAE1P78406 AC104506.1-201ENST00000609247 429 ntBASIC13.91□□□□□ -0.18
RAE1P78406 AL136301.1-201ENST00000615830 422 ntBASIC13.91□□□□□ -0.18
RAE1P78406 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RAE1P78406 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 TUBB8P4-201ENST00000511806 1324 ntBASIC13.9□□□□□ -0.18
RAE1P78406 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.9□□□□□ -0.18
RAE1P78406 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RAE1P78406 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 SHC1P1-201ENST00000425230 1745 ntBASIC13.9□□□□□ -0.18
RAE1P78406 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAE1P78406 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 AL022313.4-201ENST00000562756 2046 ntBASIC13.9□□□□□ -0.18
RAE1P78406 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 MIR326-201ENST00000362220 95 ntBASIC13.9□□□□□ -0.18
RAE1P78406 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.9□□□□□ -0.18
RAE1P78406 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 AC026954.1-201ENST00000429771 1293 ntBASIC13.9□□□□□ -0.18
RAE1P78406 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.9□□□□□ -0.18
RAE1P78406 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.9□□□□□ -0.18
RAE1P78406 AL355994.2-201ENST00000447882 704 ntBASIC13.9□□□□□ -0.18
RAE1P78406 HIST2H2BB-201ENST00000449108 381 ntBASIC13.9□□□□□ -0.18
RAE1P78406 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.9□□□□□ -0.18
RAE1P78406 COX20P2-201ENST00000452636 358 ntBASIC13.9□□□□□ -0.18
RAE1P78406 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.9□□□□□ -0.18
RAE1P78406 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.9□□□□□ -0.18
RAE1P78406 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RAE1P78406 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.9□□□□□ -0.18
RAE1P78406 AC005225.4-201ENST00000557330 545 ntBASIC13.9□□□□□ -0.18
RAE1P78406 AC005586.2-201ENST00000563946 837 ntBASIC13.9□□□□□ -0.18
RAE1P78406 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.9□□□□□ -0.18
RAE1P78406 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.9□□□□□ -0.18
RAE1P78406 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RAE1P78406 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 AC104581.4-201ENST00000623126 3052 ntBASIC13.9□□□□□ -0.18
RAE1P78406 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAE1P78406 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAE1P78406 AC089987.1-201ENST00000551654 2209 ntBASIC13.9□□□□□ -0.18
RAE1P78406 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms