Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.07□□□□□ -0.32
SLC25A1P53007 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.07□□□□□ -0.32
SLC25A1P53007 PIN1P1-201ENST00000412108 996 ntBASIC13.07□□□□□ -0.32
SLC25A1P53007 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.07□□□□□ -0.32
SLC25A1P53007 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 AC011495.1-201ENST00000498085 584 ntBASIC13.07□□□□□ -0.32
SLC25A1P53007 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.07□□□□□ -0.32
SLC25A1P53007 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 AC068587.3-201ENST00000526613 355 ntBASIC13.07□□□□□ -0.32
SLC25A1P53007 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.07□□□□□ -0.32
SLC25A1P53007 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.07□□□□□ -0.32
SLC25A1P53007 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.07□□□□□ -0.32
SLC25A1P53007 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
SLC25A1P53007 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SLC25A1P53007 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SLC25A1P53007 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SLC25A1P53007 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.07□□□□□ -0.32
SLC25A1P53007 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 AC130686.1-201ENST00000622936 2466 ntBASIC13.06□□□□□ -0.32
SLC25A1P53007 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SLC25A1P53007 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 TPM3P8-201ENST00000330554 643 ntBASIC13.06□□□□□ -0.32
SLC25A1P53007 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 AL161932.2-201ENST00000435436 679 ntBASIC13.06□□□□□ -0.32
SLC25A1P53007 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.06□□□□□ -0.32
SLC25A1P53007 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.06□□□□□ -0.32
SLC25A1P53007 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.06□□□□□ -0.32
SLC25A1P53007 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SLC25A1P53007 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 AC106820.3-201ENST00000561653 397 ntBASIC13.06□□□□□ -0.32
SLC25A1P53007 WASH4P-201ENST00000564273 1246 ntBASIC13.06□□□□□ -0.32
SLC25A1P53007 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.06□□□□□ -0.32
SLC25A1P53007 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 AL355385.1-201ENST00000606123 409 ntBASIC13.06□□□□□ -0.32
SLC25A1P53007 AC104506.1-201ENST00000609247 429 ntBASIC13.06□□□□□ -0.32
SLC25A1P53007 AC132938.4-201ENST00000623835 848 ntBASIC13.06□□□□□ -0.32
SLC25A1P53007 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SLC25A1P53007 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.06□□□□□ -0.32
SLC25A1P53007 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SLC25A1P53007 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SLC25A1P53007 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC25A1P53007 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC25A1P53007 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SLC25A1P53007 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms