Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 FKBP4P6-201ENST00000457486 1332 ntBASIC13.4□□□□□ -0.26
HMGA2P52926 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.4□□□□□ -0.26
HMGA2P52926 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.4□□□□□ -0.26
HMGA2P52926 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
HMGA2P52926 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
HMGA2P52926 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.4□□□□□ -0.26
HMGA2P52926 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.4□□□□□ -0.26
HMGA2P52926 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.4□□□□□ -0.26
HMGA2P52926 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.4□□□□□ -0.26
HMGA2P52926 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HMGA2P52926 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HMGA2P52926 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HMGA2P52926 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGA2P52926 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGA2P52926 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
HMGA2P52926 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HMGA2P52926 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
HMGA2P52926 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HMGA2P52926 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 USP17L6P-201ENST00000382470 1197 ntBASIC13.39□□□□□ -0.27
HMGA2P52926 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 AC098850.1-201ENST00000419919 790 ntBASIC13.39□□□□□ -0.27
HMGA2P52926 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.39□□□□□ -0.27
HMGA2P52926 AC093433.1-201ENST00000458048 571 ntBASIC13.39□□□□□ -0.27
HMGA2P52926 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.39□□□□□ -0.27
HMGA2P52926 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.39□□□□□ -0.27
HMGA2P52926 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.39□□□□□ -0.27
HMGA2P52926 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.39□□□□□ -0.27
HMGA2P52926 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.39□□□□□ -0.27
HMGA2P52926 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMGA2P52926 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.39□□□□□ -0.27
HMGA2P52926 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HMGA2P52926 KRT8P28-201ENST00000433288 1390 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms