Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.73■□□□□ 0.11
HOXC8P31273 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HOXC8P31273 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.73■□□□□ 0.11
HOXC8P31273 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.73■□□□□ 0.11
HOXC8P31273 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.73■□□□□ 0.11
HOXC8P31273 TPT1P11-201ENST00000458482 498 ntBASIC15.73■□□□□ 0.11
HOXC8P31273 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.73■□□□□ 0.11
HOXC8P31273 KLF17P1-201ENST00000547105 1126 ntBASIC15.73■□□□□ 0.11
HOXC8P31273 MIR5196-201ENST00000578146 115 ntBASIC15.73■□□□□ 0.11
HOXC8P31273 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.73■□□□□ 0.11
HOXC8P31273 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 FGD5P1-202ENST00000614866 2498 ntBASIC15.73■□□□□ 0.11
HOXC8P31273 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 AC104640.1-201ENST00000562617 2109 ntBASIC15.73■□□□□ 0.11
HOXC8P31273 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HOXC8P31273 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HOXC8P31273 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.72■□□□□ 0.11
HOXC8P31273 AC025183.3-201ENST00000623526 1482 ntBASIC15.72■□□□□ 0.11
HOXC8P31273 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.72■□□□□ 0.11
HOXC8P31273 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HOXC8P31273 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.72■□□□□ 0.11
HOXC8P31273 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.72■□□□□ 0.11
HOXC8P31273 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
HOXC8P31273 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.72■□□□□ 0.11
HOXC8P31273 RN7SL788P-201ENST00000460504 316 ntBASIC15.72■□□□□ 0.11
HOXC8P31273 IGHV1-12-201ENST00000518307 205 ntBASIC15.72■□□□□ 0.11
HOXC8P31273 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.72■□□□□ 0.11
HOXC8P31273 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.72■□□□□ 0.11
HOXC8P31273 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HOXC8P31273 AC002044.2-201ENST00000624910 970 ntBASIC15.72■□□□□ 0.11
HOXC8P31273 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.72■□□□□ 0.11
HOXC8P31273 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
HOXC8P31273 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.72■□□□□ 0.11
HOXC8P31273 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.72■□□□□ 0.11
HOXC8P31273 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HOXC8P31273 RPL13AP3-202ENST00000494676 1473 ntBASIC15.71■□□□□ 0.11
HOXC8P31273 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HOXC8P31273 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.71■□□□□ 0.11
HOXC8P31273 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
HOXC8P31273 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.71■□□□□ 0.11
HOXC8P31273 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.71■□□□□ 0.11
HOXC8P31273 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.71■□□□□ 0.11
HOXC8P31273 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.71■□□□□ 0.11
HOXC8P31273 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.71■□□□□ 0.11
HOXC8P31273 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.71■□□□□ 0.11
HOXC8P31273 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HOXC8P31273 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.71■□□□□ 0.11
HOXC8P31273 BCAS2P2-201ENST00000425064 674 ntBASIC15.71■□□□□ 0.11
HOXC8P31273 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.71■□□□□ 0.11
HOXC8P31273 RN7SL767P-201ENST00000493013 295 ntBASIC15.71■□□□□ 0.11
HOXC8P31273 RN7SL564P-201ENST00000496309 250 ntBASIC15.71■□□□□ 0.11
HOXC8P31273 AC093826.1-201ENST00000508655 993 ntBASIC15.71■□□□□ 0.11
HOXC8P31273 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.71■□□□□ 0.11
HOXC8P31273 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
HOXC8P31273 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.71■□□□□ 0.11
HOXC8P31273 RN7SL455P-201ENST00000580629 282 ntBASIC15.71■□□□□ 0.11
HOXC8P31273 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms