Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CNN2P10-201ENST00000443067 918 ntBASIC15□□□□□ -0.01
PTPN3P26045 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15□□□□□ -0.01
PTPN3P26045 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15□□□□□ -0.01
PTPN3P26045 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15□□□□□ -0.01
PTPN3P26045 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PTPN3P26045 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PTPN3P26045 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 AL512343.1-201ENST00000605837 169 ntBASIC15□□□□□ -0.01
PTPN3P26045 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
PTPN3P26045 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PTPN3P26045 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.99□□□□□ -0.01
PTPN3P26045 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PTPN3P26045 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PTPN3P26045 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.99□□□□□ -0.01
PTPN3P26045 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 ANKRD19P-201ENST00000338192 862 ntBASIC14.99□□□□□ -0.01
PTPN3P26045 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.99□□□□□ -0.01
PTPN3P26045 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.99□□□□□ -0.01
PTPN3P26045 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PTPN3P26045 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 AL355994.2-201ENST00000447882 704 ntBASIC14.99□□□□□ -0.01
PTPN3P26045 KLF2P4-201ENST00000451959 1225 ntBASIC14.99□□□□□ -0.01
PTPN3P26045 CTBP2P5-201ENST00000454986 1264 ntBASIC14.99□□□□□ -0.01
PTPN3P26045 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.99□□□□□ -0.01
PTPN3P26045 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 AC008825.2-201ENST00000603374 718 ntBASIC14.99□□□□□ -0.01
PTPN3P26045 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.99□□□□□ -0.01
PTPN3P26045 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
PTPN3P26045 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.99□□□□□ -0.01
PTPN3P26045 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
PTPN3P26045 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN3P26045 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PTPN3P26045 CICP16-201ENST00000502609 2813 ntBASIC14.98□□□□□ -0.01
PTPN3P26045 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.98□□□□□ -0.01
PTPN3P26045 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PTPN3P26045 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.98□□□□□ -0.01
PTPN3P26045 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.98□□□□□ -0.01
PTPN3P26045 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.98□□□□□ -0.01
PTPN3P26045 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PTPN3P26045 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PTPN3P26045 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PTPN3P26045 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.98□□□□□ -0.01
PTPN3P26045 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.98□□□□□ -0.01
PTPN3P26045 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.98□□□□□ -0.01
PTPN3P26045 AC010141.1-201ENST00000411585 623 ntBASIC14.98□□□□□ -0.01
PTPN3P26045 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN3P26045 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.98□□□□□ -0.01
PTPN3P26045 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
PTPN3P26045 AC234783.1-201ENST00000441761 496 ntBASIC14.98□□□□□ -0.01
PTPN3P26045 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.98□□□□□ -0.01
PTPN3P26045 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms