Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TNFSF4P23510 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TNFSF4P23510 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TNFSF4P23510 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TNFSF4P23510 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.66□□□□□ -0.38
TNFSF4P23510 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TNFSF4P23510 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TNFSF4P23510 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
TNFSF4P23510 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TNFSF4P23510 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TNFSF4P23510 AC092135.3-201ENST00000624151 1846 ntBASIC12.65□□□□□ -0.38
TNFSF4P23510 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TNFSF4P23510 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 BRWD1P1-201ENST00000401091 371 ntBASIC12.65□□□□□ -0.38
TNFSF4P23510 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 C2orf69P2-201ENST00000562032 1123 ntBASIC12.65□□□□□ -0.38
TNFSF4P23510 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.65□□□□□ -0.38
TNFSF4P23510 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 RN7SL560P-201ENST00000577943 264 ntBASIC12.65□□□□□ -0.38
TNFSF4P23510 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.65□□□□□ -0.38
TNFSF4P23510 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.65□□□□□ -0.38
TNFSF4P23510 AC073413.1-201ENST00000603927 732 ntBASIC12.65□□□□□ -0.38
TNFSF4P23510 AC244157.2-201ENST00000616239 1006 ntBASIC12.65□□□□□ -0.38
TNFSF4P23510 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TNFSF4P23510 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 AC013726.1-201ENST00000563747 2285 ntBASIC12.65□□□□□ -0.38
TNFSF4P23510 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.65□□□□□ -0.38
TNFSF4P23510 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFSF4P23510 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.65□□□□□ -0.38
TNFSF4P23510 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFSF4P23510 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TNFSF4P23510 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.65□□□□□ -0.39
TNFSF4P23510 AC018442.1-201ENST00000421439 2061 ntBASIC12.65□□□□□ -0.39
TNFSF4P23510 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
TNFSF4P23510 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.65□□□□□ -0.39
TNFSF4P23510 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.65□□□□□ -0.39
TNFSF4P23510 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.65□□□□□ -0.39
TNFSF4P23510 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TNFSF4P23510 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 MRPL37P1-201ENST00000592451 1337 ntBASIC12.64□□□□□ -0.39
TNFSF4P23510 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.64□□□□□ -0.39
TNFSF4P23510 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
TNFSF4P23510 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TNFSF4P23510 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TNFSF4P23510 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFSF4P23510 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms