Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.89□□□□□ -0.03
VCLP18206 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 AC089987.1-201ENST00000551654 2209 ntBASIC14.89□□□□□ -0.03
VCLP18206 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 AC027612.1-201ENST00000445234 2395 ntBASIC14.89□□□□□ -0.03
VCLP18206 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 TCAF1P1-201ENST00000414990 2232 ntBASIC14.88□□□□□ -0.03
VCLP18206 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.88□□□□□ -0.03
VCLP18206 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 CD8B2-202ENST00000417670 633 ntBASIC14.88□□□□□ -0.03
VCLP18206 CNN2P8-201ENST00000421872 913 ntBASIC14.88□□□□□ -0.03
VCLP18206 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.88□□□□□ -0.03
VCLP18206 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.88□□□□□ -0.03
VCLP18206 FO681548.1-201ENST00000455617 1132 ntBASIC14.88□□□□□ -0.03
VCLP18206 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.88□□□□□ -0.03
VCLP18206 AC023310.1-201ENST00000554836 735 ntBASIC14.88□□□□□ -0.03
VCLP18206 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.88□□□□□ -0.03
VCLP18206 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.88□□□□□ -0.03
VCLP18206 AC244669.2-201ENST00000612320 853 ntBASIC14.88□□□□□ -0.03
VCLP18206 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.88□□□□□ -0.03
VCLP18206 MIR6775-201ENST00000617557 69 ntBASIC14.88□□□□□ -0.03
VCLP18206 MIR6752-201ENST00000618442 71 ntBASIC14.88□□□□□ -0.03
VCLP18206 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VCLP18206 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 AL356585.2-201ENST00000625078 2396 ntBASIC14.88□□□□□ -0.03
VCLP18206 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VCLP18206 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VCLP18206 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VCLP18206 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms