Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.08■□□□□ 0
HMGA1P17096 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
HMGA1P17096 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 AC064801.2-201ENST00000625052 1303 ntBASIC15.08■□□□□ 0
HMGA1P17096 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.08■□□□□ 0
HMGA1P17096 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HMGA1P17096 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.08■□□□□ 0
HMGA1P17096 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 AC046158.3-201ENST00000624947 2558 ntBASIC15.08■□□□□ 0
HMGA1P17096 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGA1P17096 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.08■□□□□ 0
HMGA1P17096 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.08■□□□□ 0
HMGA1P17096 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.08■□□□□ 0
HMGA1P17096 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.07■□□□□ 0
HMGA1P17096 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HMGA1P17096 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.07■□□□□ 0
HMGA1P17096 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.07■□□□□ 0
HMGA1P17096 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.07■□□□□ 0
HMGA1P17096 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.07■□□□□ 0
HMGA1P17096 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HMGA1P17096 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 AC098935.1-201ENST00000446057 611 ntBASIC15.07■□□□□ 0
HMGA1P17096 FTH1P22-201ENST00000456305 520 ntBASIC15.07■□□□□ 0
HMGA1P17096 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 RN7SL181P-201ENST00000462921 277 ntBASIC15.07■□□□□ 0
HMGA1P17096 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.07■□□□□ 0
HMGA1P17096 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
HMGA1P17096 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.07■□□□□ 0
HMGA1P17096 RN7SL555P-201ENST00000584742 339 ntBASIC15.07■□□□□ 0
HMGA1P17096 MIR4522-201ENST00000584932 87 ntBASIC15.07■□□□□ 0
HMGA1P17096 AC007326.1-201ENST00000604539 458 ntBASIC15.07■□□□□ 0
HMGA1P17096 AC005632.3-201ENST00000605544 308 ntBASIC15.07■□□□□ 0
HMGA1P17096 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 BRD7P5-201ENST00000299197 1822 ntBASIC15.07■□□□□ 0
HMGA1P17096 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
HMGA1P17096 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.07■□□□□ 0
HMGA1P17096 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 AC074138.1-201ENST00000611182 1303 ntBASIC15.07■□□□□ 0
HMGA1P17096 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.07■□□□□ 0
HMGA1P17096 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.07■□□□□ 0
HMGA1P17096 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGA1P17096 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.06■□□□□ 0
HMGA1P17096 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMGA1P17096 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
HMGA1P17096 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 AL512430.1-201ENST00000392575 860 ntBASIC15.06■□□□□ 0
HMGA1P17096 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 OR8T1P-201ENST00000421347 918 ntBASIC15.06■□□□□ 0
HMGA1P17096 AC078991.1-201ENST00000437297 610 ntBASIC15.06■□□□□ 0
HMGA1P17096 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.06■□□□□ 0
HMGA1P17096 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.06■□□□□ 0
HMGA1P17096 AC130709.1-201ENST00000484779 1212 ntBASIC15.06■□□□□ 0
HMGA1P17096 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.06■□□□□ 0
HMGA1P17096 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 IQSEC3P1-201ENST00000538799 536 ntBASIC15.06■□□□□ 0
HMGA1P17096 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.06■□□□□ 0
HMGA1P17096 AC087045.2-201ENST00000606279 1003 ntBASIC15.06■□□□□ 0
HMGA1P17096 MIR6842-201ENST00000612539 65 ntBASIC15.06■□□□□ 0
HMGA1P17096 AC242376.2-201ENST00000619355 883 ntBASIC15.06■□□□□ 0
HMGA1P17096 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.06■□□□□ 0
HMGA1P17096 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HMGA1P17096 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.06■□□□□ 0
HMGA1P17096 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.06■□□□□ 0
HMGA1P17096 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.06■□□□□ 0
HMGA1P17096 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGA1P17096 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.06■□□□□ 0
HMGA1P17096 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
HMGA1P17096 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.06■□□□□ 0
HMGA1P17096 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.06■□□□□ 0
HMGA1P17096 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.06■□□□□ 0
HMGA1P17096 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms