Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UBCP0CG48 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.98□□□□□ -0.33
UBCP0CG48 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 AC020910.6-201ENST00000623084 1459 ntBASIC12.98□□□□□ -0.33
UBCP0CG48 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
UBCP0CG48 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 MRPL37P1-201ENST00000592451 1337 ntBASIC12.98□□□□□ -0.33
UBCP0CG48 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
UBCP0CG48 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.98□□□□□ -0.33
UBCP0CG48 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.98□□□□□ -0.33
UBCP0CG48 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 AC124283.3-201ENST00000570869 594 ntBASIC12.98□□□□□ -0.33
UBCP0CG48 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.98□□□□□ -0.33
UBCP0CG48 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.98□□□□□ -0.33
UBCP0CG48 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 AC093726.1-201ENST00000608064 963 ntBASIC12.98□□□□□ -0.33
UBCP0CG48 AP005019.2-201ENST00000615104 511 ntBASIC12.98□□□□□ -0.33
UBCP0CG48 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 AC005562.1-201ENST00000583030 3219 ntBASIC12.98□□□□□ -0.33
UBCP0CG48 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBCP0CG48 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.98□□□□□ -0.33
UBCP0CG48 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBCP0CG48 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UBCP0CG48 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.97□□□□□ -0.33
UBCP0CG48 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.97□□□□□ -0.33
UBCP0CG48 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
UBCP0CG48 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBCP0CG48 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 ACTBP8-201ENST00000403258 1108 ntBASIC12.97□□□□□ -0.33
UBCP0CG48 EIF3FP3-201ENST00000434851 1086 ntBASIC12.97□□□□□ -0.33
UBCP0CG48 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.97□□□□□ -0.33
UBCP0CG48 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.97□□□□□ -0.33
UBCP0CG48 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.97□□□□□ -0.33
UBCP0CG48 AC131206.1-201ENST00000538078 1211 ntBASIC12.97□□□□□ -0.33
UBCP0CG48 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.97□□□□□ -0.33
UBCP0CG48 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UBCP0CG48 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.97□□□□□ -0.33
UBCP0CG48 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.97□□□□□ -0.33
UBCP0CG48 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.97□□□□□ -0.33
UBCP0CG48 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms