Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 AC136759.1-202ENST00000530858 2194 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.34□□□□□ -0.27
FREM3P0C091 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.33□□□□□ -0.27
FREM3P0C091 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FREM3P0C091 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.33□□□□□ -0.27
FREM3P0C091 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.33□□□□□ -0.27
FREM3P0C091 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FREM3P0C091 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FREM3P0C091 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FREM3P0C091 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FREM3P0C091 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
FREM3P0C091 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
FREM3P0C091 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
FREM3P0C091 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.33□□□□□ -0.28
FREM3P0C091 FAM58BP-201ENST00000439056 645 ntBASIC13.33□□□□□ -0.28
FREM3P0C091 VDAC1P1-201ENST00000439229 848 ntBASIC13.33□□□□□ -0.28
FREM3P0C091 AC005077.2-201ENST00000449786 690 ntBASIC13.33□□□□□ -0.28
FREM3P0C091 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.33□□□□□ -0.28
FREM3P0C091 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
FREM3P0C091 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.33□□□□□ -0.28
FREM3P0C091 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.33□□□□□ -0.28
FREM3P0C091 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.33□□□□□ -0.28
FREM3P0C091 AC131206.1-201ENST00000538078 1211 ntBASIC13.33□□□□□ -0.28
FREM3P0C091 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.33□□□□□ -0.28
FREM3P0C091 RN7SL774P-201ENST00000577467 290 ntBASIC13.33□□□□□ -0.28
FREM3P0C091 AL021578.1-201ENST00000613646 709 ntBASIC13.33□□□□□ -0.28
FREM3P0C091 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.33□□□□□ -0.28
FREM3P0C091 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FREM3P0C091 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
FREM3P0C091 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.32□□□□□ -0.28
FREM3P0C091 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.32□□□□□ -0.28
FREM3P0C091 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.32□□□□□ -0.28
FREM3P0C091 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.32□□□□□ -0.28
FREM3P0C091 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
FREM3P0C091 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
FREM3P0C091 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
FREM3P0C091 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FREM3P0C091 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms