Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CHGBP05060 HSPA8P5-201ENST00000456928 2069 ntBASIC17.56■□□□□ 0.4
CHGBP05060 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHGBP05060 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.55■□□□□ 0.4
CHGBP05060 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.55■□□□□ 0.4
CHGBP05060 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHGBP05060 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHGBP05060 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.55■□□□□ 0.4
CHGBP05060 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
CHGBP05060 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.55■□□□□ 0.4
CHGBP05060 AC003686.1-201ENST00000550956 1034 ntBASIC17.55■□□□□ 0.4
CHGBP05060 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHGBP05060 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHGBP05060 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHGBP05060 AC018629.1-201ENST00000623381 1736 ntBASIC17.55■□□□□ 0.4
CHGBP05060 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.55■□□□□ 0.4
CHGBP05060 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.55■□□□□ 0.4
CHGBP05060 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHGBP05060 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 AC090505.1-201ENST00000430515 1834 ntBASIC17.54■□□□□ 0.4
CHGBP05060 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CHGBP05060 TUBBP5-203ENST00000508529 1334 ntBASIC17.54■□□□□ 0.4
CHGBP05060 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.54■□□□□ 0.4
CHGBP05060 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 CYP46A4P-201ENST00000414953 267 ntBASIC17.54■□□□□ 0.4
CHGBP05060 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.54■□□□□ 0.4
CHGBP05060 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.54■□□□□ 0.4
CHGBP05060 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.54■□□□□ 0.4
CHGBP05060 AC026740.1-201ENST00000607068 791 ntBASIC17.54■□□□□ 0.4
CHGBP05060 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.54■□□□□ 0.4
CHGBP05060 AL139099.5-201ENST00000635274 300 ntBASIC17.54■□□□□ 0.4
CHGBP05060 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHGBP05060 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CHGBP05060 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.53■□□□□ 0.4
CHGBP05060 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHGBP05060 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHGBP05060 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.53■□□□□ 0.4
CHGBP05060 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms