Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.27□□□□□ -0.28
SPTA1P02549 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.27□□□□□ -0.28
SPTA1P02549 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPTA1P02549 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
SPTA1P02549 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
SPTA1P02549 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.27□□□□□ -0.28
SPTA1P02549 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPTA1P02549 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPTA1P02549 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPTA1P02549 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPTA1P02549 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.27□□□□□ -0.28
SPTA1P02549 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.27□□□□□ -0.28
SPTA1P02549 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SPTA1P02549 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SPTA1P02549 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
SPTA1P02549 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.27□□□□□ -0.29
SPTA1P02549 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.27□□□□□ -0.29
SPTA1P02549 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.27□□□□□ -0.29
SPTA1P02549 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.27□□□□□ -0.29
SPTA1P02549 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.27□□□□□ -0.29
SPTA1P02549 PGAM1P12-201ENST00000505622 748 ntBASIC13.27□□□□□ -0.29
SPTA1P02549 BCL2L12P1-201ENST00000508390 733 ntBASIC13.27□□□□□ -0.29
SPTA1P02549 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.27□□□□□ -0.29
SPTA1P02549 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.27□□□□□ -0.29
SPTA1P02549 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 MIR6720-201ENST00000611664 98 ntBASIC13.27□□□□□ -0.29
SPTA1P02549 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.27□□□□□ -0.29
SPTA1P02549 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SPTA1P02549 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
SPTA1P02549 AC024909.3-201ENST00000611513 2257 ntBASIC13.27□□□□□ -0.29
SPTA1P02549 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SPTA1P02549 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SPTA1P02549 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.27□□□□□ -0.29
SPTA1P02549 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.27□□□□□ -0.29
SPTA1P02549 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.27□□□□□ -0.29
SPTA1P02549 AC090820.1-201ENST00000519722 591 ntBASIC13.27□□□□□ -0.29
SPTA1P02549 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.27□□□□□ -0.29
SPTA1P02549 AC003686.1-201ENST00000550956 1034 ntBASIC13.27□□□□□ -0.29
SPTA1P02549 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.27□□□□□ -0.29
SPTA1P02549 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.27□□□□□ -0.29
SPTA1P02549 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPTA1P02549 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SPTA1P02549 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.26□□□□□ -0.29
SPTA1P02549 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.26□□□□□ -0.29
SPTA1P02549 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.26□□□□□ -0.29
SPTA1P02549 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC13.26□□□□□ -0.29
SPTA1P02549 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.26□□□□□ -0.29
SPTA1P02549 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SPTA1P02549 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.26□□□□□ -0.29
SPTA1P02549 AL035414.1-201ENST00000451327 857 ntBASIC13.26□□□□□ -0.29
SPTA1P02549 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.26□□□□□ -0.29
SPTA1P02549 BPIFB5P-201ENST00000457066 1099 ntBASIC13.26□□□□□ -0.29
SPTA1P02549 AC226150.1-201ENST00000544259 466 ntBASIC13.26□□□□□ -0.29
SPTA1P02549 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
SPTA1P02549 MIR6125-201ENST00000618986 96 ntBASIC13.26□□□□□ -0.29
SPTA1P02549 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.26□□□□□ -0.29
SPTA1P02549 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 AC015656.1-201ENST00000624209 3578 ntBASIC13.26□□□□□ -0.29
SPTA1P02549 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SPTA1P02549 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.26□□□□□ -0.29
SPTA1P02549 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPTA1P02549 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SPTA1P02549 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPTA1P02549 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.25□□□□□ -0.29
SPTA1P02549 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SPTA1P02549 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms