Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 AKR1C7P-201ENST00000305623 895 ntBASIC12.78□□□□□ -0.36
CCNKO75909 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 RPS2P1-201ENST00000434010 821 ntBASIC12.78□□□□□ -0.36
CCNKO75909 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.78□□□□□ -0.36
CCNKO75909 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.78□□□□□ -0.36
CCNKO75909 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.78□□□□□ -0.36
CCNKO75909 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.78□□□□□ -0.36
CCNKO75909 AC093458.2-201ENST00000623150 629 ntBASIC12.78□□□□□ -0.36
CCNKO75909 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.78□□□□□ -0.36
CCNKO75909 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.78□□□□□ -0.36
CCNKO75909 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCNKO75909 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCNKO75909 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCNKO75909 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCNKO75909 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCNKO75909 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CCNKO75909 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCNKO75909 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.77□□□□□ -0.36
CCNKO75909 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.77□□□□□ -0.36
CCNKO75909 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.77□□□□□ -0.36
CCNKO75909 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCNKO75909 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
CCNKO75909 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.77□□□□□ -0.36
CCNKO75909 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCNKO75909 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCNKO75909 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
CCNKO75909 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.77□□□□□ -0.37
CCNKO75909 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 MRPL20P1-201ENST00000400819 433 ntBASIC12.77□□□□□ -0.37
CCNKO75909 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCNKO75909 PMS2P4-201ENST00000412466 1052 ntBASIC12.77□□□□□ -0.37
CCNKO75909 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 FAM185BP-201ENST00000443595 716 ntBASIC12.77□□□□□ -0.37
CCNKO75909 KRT18P31-201ENST00000506277 1292 ntBASIC12.77□□□□□ -0.37
CCNKO75909 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.77□□□□□ -0.37
CCNKO75909 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.77□□□□□ -0.37
CCNKO75909 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.77□□□□□ -0.37
CCNKO75909 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.77□□□□□ -0.37
CCNKO75909 AC004790.2-201ENST00000623588 572 ntBASIC12.77□□□□□ -0.37
CCNKO75909 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.77□□□□□ -0.37
CCNKO75909 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCNKO75909 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.77□□□□□ -0.37
CCNKO75909 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCNKO75909 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCNKO75909 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms