Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.86□□□□□ -0.19
LDB3O75112 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LDB3O75112 MYADML-201ENST00000474610 2147 ntBASIC13.85□□□□□ -0.19
LDB3O75112 AC015818.8-201ENST00000587907 1519 ntBASIC13.85□□□□□ -0.19
LDB3O75112 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.85□□□□□ -0.19
LDB3O75112 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.85□□□□□ -0.19
LDB3O75112 AL590440.2-201ENST00000641973 1595 ntBASIC13.85□□□□□ -0.19
LDB3O75112 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.85□□□□□ -0.19
LDB3O75112 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.85□□□□□ -0.19
LDB3O75112 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 MTX1P1-201ENST00000440904 838 ntBASIC13.85□□□□□ -0.19
LDB3O75112 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 Z93015.1-201ENST00000451718 390 ntBASIC13.85□□□□□ -0.19
LDB3O75112 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.85□□□□□ -0.19
LDB3O75112 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.85□□□□□ -0.19
LDB3O75112 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LDB3O75112 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.85□□□□□ -0.19
LDB3O75112 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.85□□□□□ -0.19
LDB3O75112 AC027601.3-201ENST00000622907 509 ntBASIC13.85□□□□□ -0.19
LDB3O75112 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.85□□□□□ -0.19
LDB3O75112 AL033527.4-201ENST00000641026 673 ntBASIC13.85□□□□□ -0.19
LDB3O75112 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.85□□□□□ -0.19
LDB3O75112 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.85□□□□□ -0.19
LDB3O75112 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.85□□□□□ -0.19
LDB3O75112 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.85□□□□□ -0.19
LDB3O75112 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LDB3O75112 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LDB3O75112 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LDB3O75112 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LDB3O75112 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.84□□□□□ -0.19
LDB3O75112 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 SNX18-202ENST00000343017 3140 ntBASIC13.84□□□□□ -0.19
LDB3O75112 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.84□□□□□ -0.19
LDB3O75112 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.84□□□□□ -0.19
LDB3O75112 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.84□□□□□ -0.19
LDB3O75112 KHSRPP1-201ENST00000427983 1768 ntBASIC13.84□□□□□ -0.19
LDB3O75112 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LDB3O75112 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LDB3O75112 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.84□□□□□ -0.19
LDB3O75112 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.84□□□□□ -0.19
LDB3O75112 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LDB3O75112 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.84□□□□□ -0.19
LDB3O75112 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.84□□□□□ -0.19
LDB3O75112 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LDB3O75112 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.84□□□□□ -0.19
LDB3O75112 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.84□□□□□ -0.19
LDB3O75112 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LDB3O75112 RPSAP36-202ENST00000494591 1261 ntBASIC13.84□□□□□ -0.19
LDB3O75112 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LDB3O75112 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.84□□□□□ -0.19
LDB3O75112 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.84□□□□□ -0.19
LDB3O75112 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.84□□□□□ -0.19
LDB3O75112 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.84□□□□□ -0.19
LDB3O75112 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.84□□□□□ -0.19
LDB3O75112 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.84□□□□□ -0.19
LDB3O75112 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.84□□□□□ -0.19
LDB3O75112 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.84□□□□□ -0.19
LDB3O75112 AC008825.2-201ENST00000603374 718 ntBASIC13.84□□□□□ -0.19
LDB3O75112 MIR6752-201ENST00000618442 71 ntBASIC13.84□□□□□ -0.19
LDB3O75112 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.84□□□□□ -0.19
LDB3O75112 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms