Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 MRPL37P1-201ENST00000592451 1337 ntBASIC13.87□□□□□ -0.19
PRAMEF2O60811 AL023775.1-201ENST00000454907 1746 ntBASIC13.87□□□□□ -0.19
PRAMEF2O60811 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
PRAMEF2O60811 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRAMEF2O60811 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PRAMEF2O60811 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PRAMEF2O60811 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRAMEF2O60811 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRAMEF2O60811 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.86□□□□□ -0.19
PRAMEF2O60811 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.86□□□□□ -0.19
PRAMEF2O60811 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 PPY2P-201ENST00000582808 702 ntBASIC13.86□□□□□ -0.19
PRAMEF2O60811 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 ZACNP1-201ENST00000612259 710 ntBASIC13.86□□□□□ -0.19
PRAMEF2O60811 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 AC244157.2-201ENST00000616239 1006 ntBASIC13.86□□□□□ -0.19
PRAMEF2O60811 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 AC020910.5-201ENST00000623668 1865 ntBASIC13.86□□□□□ -0.19
PRAMEF2O60811 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 AC113367.3-201ENST00000508316 1912 ntBASIC13.86□□□□□ -0.19
PRAMEF2O60811 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAMEF2O60811 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.86□□□□□ -0.19
PRAMEF2O60811 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 MIR663B-201ENST00000408361 115 ntBASIC13.85□□□□□ -0.19
PRAMEF2O60811 HSPB1P2-201ENST00000448722 546 ntBASIC13.85□□□□□ -0.19
PRAMEF2O60811 ALG3P1-201ENST00000508806 1114 ntBASIC13.85□□□□□ -0.19
PRAMEF2O60811 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.85□□□□□ -0.19
PRAMEF2O60811 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRAMEF2O60811 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms