Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.19■□□□□ 0.02
TNRC18O15417 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 TCAF2P1-201ENST00000291129 2421 ntBASIC15.19■□□□□ 0.02
TNRC18O15417 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC15.19■□□□□ 0.02
TNRC18O15417 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.19■□□□□ 0.02
TNRC18O15417 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 OR2W2P-201ENST00000406313 909 ntBASIC15.19■□□□□ 0.02
TNRC18O15417 NOS2P3-201ENST00000411468 867 ntBASIC15.19■□□□□ 0.02
TNRC18O15417 NOS2P2-201ENST00000426269 867 ntBASIC15.19■□□□□ 0.02
TNRC18O15417 AC096713.1-201ENST00000514650 978 ntBASIC15.19■□□□□ 0.02
TNRC18O15417 HNRNPA1P11-201ENST00000580106 956 ntBASIC15.19■□□□□ 0.02
TNRC18O15417 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC15.19■□□□□ 0.02
TNRC18O15417 AC147067.2-201ENST00000608161 289 ntBASIC15.19■□□□□ 0.02
TNRC18O15417 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TNRC18O15417 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TNRC18O15417 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNRC18O15417 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC15.18■□□□□ 0.02
TNRC18O15417 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 ACTBP14-201ENST00000411655 1089 ntBASIC15.18■□□□□ 0.02
TNRC18O15417 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TNRC18O15417 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.18■□□□□ 0.02
TNRC18O15417 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 AC009238.3-201ENST00000512705 217 ntBASIC15.18■□□□□ 0.02
TNRC18O15417 HAX1-211ENST00000532105 771 ntTSL 3 BASIC15.18■□□□□ 0.02
TNRC18O15417 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.18■□□□□ 0.02
TNRC18O15417 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TNRC18O15417 BIN3-212ENST00000640731 450 ntTSL 5 BASIC15.18■□□□□ 0.02
TNRC18O15417 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.18■□□□□ 0.02
TNRC18O15417 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC15.18■□□□□ 0.02
TNRC18O15417 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TNRC18O15417 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.18■□□□□ 0.02
TNRC18O15417 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC15.18■□□□□ 0.02
TNRC18O15417 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TNRC18O15417 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC15.18■□□□□ 0.02
TNRC18O15417 CLPP-204ENST00000596149 745 ntTSL 2 BASIC15.18■□□□□ 0.02
TNRC18O15417 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 CICP23-201ENST00000605013 2741 ntBASIC15.18■□□□□ 0.02
TNRC18O15417 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TNRC18O15417 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TNRC18O15417 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.18■□□□□ 0.02
TNRC18O15417 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TNRC18O15417 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.18■□□□□ 0.02
TNRC18O15417 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC15.18■□□□□ 0.02
TNRC18O15417 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC15.18■□□□□ 0.02
TNRC18O15417 AC006273.1-201ENST00000606966 861 ntBASIC15.18■□□□□ 0.02
TNRC18O15417 AC091736.1-201ENST00000609370 305 ntBASIC15.18■□□□□ 0.02
TNRC18O15417 AL591471.1-201ENST00000621855 229 ntBASIC15.18■□□□□ 0.02
TNRC18O15417 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC15.18■□□□□ 0.02
TNRC18O15417 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
TNRC18O15417 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.17■□□□□ 0.02
TNRC18O15417 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.17■□□□□ 0.02
TNRC18O15417 LAP3P2-201ENST00000454686 1454 ntBASIC15.17■□□□□ 0.02
TNRC18O15417 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC15.17■□□□□ 0.02
TNRC18O15417 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.17■□□□□ 0.02
TNRC18O15417 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TNRC18O15417 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TNRC18O15417 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TNRC18O15417 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TNRC18O15417 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TNRC18O15417 NAA10-205ENST00000393712 908 ntTSL 5 BASIC15.17■□□□□ 0.02
TNRC18O15417 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC15.17■□□□□ 0.02
TNRC18O15417 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC15.17■□□□□ 0.02
TNRC18O15417 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.17■□□□□ 0.02
TNRC18O15417 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.17■□□□□ 0.02
TNRC18O15417 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.17■□□□□ 0.02
TNRC18O15417 RN7SL624P-201ENST00000580297 278 ntBASIC15.17■□□□□ 0.02
TNRC18O15417 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms