Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD2O14647 AC147876.1-201ENST00000504408 322 ntBASIC19.65■□□□□ 0.74
CHD2O14647 AC112250.1-201ENST00000504640 745 ntBASIC19.65■□□□□ 0.74
CHD2O14647 AC011431.1-201ENST00000512971 230 ntBASIC19.65■□□□□ 0.74
CHD2O14647 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD2O14647 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CHD2O14647 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD2O14647 AL512310.5-201ENST00000551999 515 ntBASIC19.65■□□□□ 0.74
CHD2O14647 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC19.65■□□□□ 0.74
CHD2O14647 AC026120.2-201ENST00000617239 309 ntBASIC19.65■□□□□ 0.74
CHD2O14647 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD2O14647 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHD2O14647 PGK1P2-201ENST00000431702 1214 ntBASIC19.65■□□□□ 0.74
CHD2O14647 MAGEA7P-201ENST00000436482 942 ntBASIC19.65■□□□□ 0.74
CHD2O14647 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD2O14647 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 RN7SL684P-201ENST00000465665 294 ntBASIC19.65■□□□□ 0.74
CHD2O14647 SNRPD2P2-201ENST00000473818 333 ntBASIC19.65■□□□□ 0.74
CHD2O14647 AP003040.1-201ENST00000532044 1024 ntBASIC19.65■□□□□ 0.74
CHD2O14647 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC19.65■□□□□ 0.74
CHD2O14647 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD2O14647 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHD2O14647 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.65■□□□□ 0.74
CHD2O14647 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHD2O14647 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD2O14647 RPL13AP3-202ENST00000494676 1473 ntBASIC19.64■□□□□ 0.74
CHD2O14647 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHD2O14647 SALL4P6-201ENST00000429385 1691 ntBASIC19.64■□□□□ 0.74
CHD2O14647 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CHD2O14647 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHD2O14647 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHD2O14647 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.64■□□□□ 0.74
CHD2O14647 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.64■□□□□ 0.74
CHD2O14647 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHD2O14647 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHD2O14647 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHD2O14647 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 MIR611-201ENST00000384869 67 ntBASIC19.64■□□□□ 0.73
CHD2O14647 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHD2O14647 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CHD2O14647 COQ10BP2-201ENST00000513804 724 ntBASIC19.64■□□□□ 0.73
CHD2O14647 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC19.64■□□□□ 0.73
CHD2O14647 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC19.64■□□□□ 0.73
CHD2O14647 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC19.64■□□□□ 0.73
CHD2O14647 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC19.64■□□□□ 0.73
CHD2O14647 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC19.64■□□□□ 0.73
CHD2O14647 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.64■□□□□ 0.73
CHD2O14647 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHD2O14647 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD2O14647 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 PPT1-215ENST00000641471 2368 ntBASIC19.63■□□□□ 0.73
CHD2O14647 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD2O14647 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD2O14647 OLA1P2-201ENST00000395519 1264 ntBASIC19.63■□□□□ 0.73
CHD2O14647 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC19.63■□□□□ 0.73
CHD2O14647 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC19.63■□□□□ 0.73
CHD2O14647 PSME2P2-201ENST00000453033 700 ntBASIC19.63■□□□□ 0.73
CHD2O14647 AC099328.1-201ENST00000498809 1030 ntBASIC19.63■□□□□ 0.73
CHD2O14647 AL353622.2-201ENST00000605846 425 ntBASIC19.63■□□□□ 0.73
CHD2O14647 AC006986.1-201ENST00000612764 241 ntBASIC19.63■□□□□ 0.73
CHD2O14647 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
CHD2O14647 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD2O14647 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CHD2O14647 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHD2O14647 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CHD2O14647 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD2O14647 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD2O14647 LILRP2-202ENST00000413572 1383 ntBASIC19.63■□□□□ 0.73
CHD2O14647 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD2O14647 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD2O14647 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms