Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.62■■□□□ 1.69
PCDHA2Q9Y5H9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PCDHA2Q9Y5H9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA2Q9Y5H9 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA2Q9Y5H9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PCDHA2Q9Y5H9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
PCDHA2Q9Y5H9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA2Q9Y5H9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA2Q9Y5H9 AC110285.6-201ENST00000617652 491 ntBASIC25.61■■□□□ 1.69
PCDHA2Q9Y5H9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PCDHA2Q9Y5H9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA2Q9Y5H9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA2Q9Y5H9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA2Q9Y5H9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.6■■□□□ 1.69
PCDHA2Q9Y5H9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA2Q9Y5H9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA2Q9Y5H9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA2Q9Y5H9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHA2Q9Y5H9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHA2Q9Y5H9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
PCDHA2Q9Y5H9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHA2Q9Y5H9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA2Q9Y5H9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA2Q9Y5H9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA2Q9Y5H9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA2Q9Y5H9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA2Q9Y5H9 AC096631.2-201ENST00000436136 790 ntBASIC25.59■■□□□ 1.69
PCDHA2Q9Y5H9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA2Q9Y5H9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA2Q9Y5H9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA2Q9Y5H9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA2Q9Y5H9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA2Q9Y5H9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDHA2Q9Y5H9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA2Q9Y5H9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA2Q9Y5H9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHA2Q9Y5H9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHA2Q9Y5H9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA2Q9Y5H9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.57■■□□□ 1.68
PCDHA2Q9Y5H9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHA2Q9Y5H9 AC131274.2-201ENST00000580697 1507 ntBASIC25.57■■□□□ 1.68
PCDHA2Q9Y5H9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA2Q9Y5H9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
PCDHA2Q9Y5H9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHA2Q9Y5H9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.56■■□□□ 1.68
PCDHA2Q9Y5H9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA2Q9Y5H9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.56■■□□□ 1.68
PCDHA2Q9Y5H9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA2Q9Y5H9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHA2Q9Y5H9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA2Q9Y5H9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA2Q9Y5H9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PCDHA2Q9Y5H9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHA2Q9Y5H9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PCDHA2Q9Y5H9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PCDHA2Q9Y5H9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA2Q9Y5H9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA2Q9Y5H9 AC005703.6-201ENST00000623265 1329 ntBASIC25.53■■□□□ 1.68
PCDHA2Q9Y5H9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PCDHA2Q9Y5H9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
PCDHA2Q9Y5H9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA2Q9Y5H9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHA2Q9Y5H9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA2Q9Y5H9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA2Q9Y5H9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHA2Q9Y5H9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA2Q9Y5H9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PCDHA2Q9Y5H9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA2Q9Y5H9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA2Q9Y5H9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHA2Q9Y5H9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.51■■□□□ 1.67
PCDHA2Q9Y5H9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA2Q9Y5H9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHA2Q9Y5H9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHA2Q9Y5H9 AC133561.4-201ENST00000566112 224 ntBASIC25.51■■□□□ 1.67
PCDHA2Q9Y5H9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA2Q9Y5H9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHA2Q9Y5H9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA2Q9Y5H9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA2Q9Y5H9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHA2Q9Y5H9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 AC005837.3-201ENST00000612163 286 ntBASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 ABCB10P4-201ENST00000566803 2184 ntBASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms