Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SMPD5-203ENST00000639008 1464 ntBASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 AL157400.5-201ENST00000507624 621 ntBASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGB1Q9Y5G3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB1Q9Y5G3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 KRT18P10-201ENST00000388836 1287 ntBASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGB1Q9Y5G3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB1Q9Y5G3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGB1Q9Y5G3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB1Q9Y5G3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.79■□□□□ 0.92
PCDHGB1Q9Y5G3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGB1Q9Y5G3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PCDHGB1Q9Y5G3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB1Q9Y5G3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB1Q9Y5G3 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB1Q9Y5G3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGB1Q9Y5G3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB1Q9Y5G3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PCDHGB1Q9Y5G3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB1Q9Y5G3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB1Q9Y5G3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGB1Q9Y5G3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGB1Q9Y5G3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 AC060814.1-201ENST00000554326 538 ntBASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB1Q9Y5G3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGB1Q9Y5G3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB1Q9Y5G3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB1Q9Y5G3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB1Q9Y5G3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB1Q9Y5G3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGB1Q9Y5G3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGB1Q9Y5G3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB1Q9Y5G3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB1Q9Y5G3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms