Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGC4Q9Y5F7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PCDHGC4Q9Y5F7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 AC005703.6-201ENST00000623265 1329 ntBASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGC4Q9Y5F7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGC4Q9Y5F7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHGC4Q9Y5F7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHGC4Q9Y5F7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGC4Q9Y5F7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHGC4Q9Y5F7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGC4Q9Y5F7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23■■□□□ 1.27
PCDHGC4Q9Y5F7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHGC4Q9Y5F7 AC131212.1-201ENST00000613771 668 ntBASIC23■■□□□ 1.27
PCDHGC4Q9Y5F7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGC4Q9Y5F7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHGC4Q9Y5F7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23■■□□□ 1.27
PCDHGC4Q9Y5F7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGC4Q9Y5F7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHGC4Q9Y5F7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHGC4Q9Y5F7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PCDHGC4Q9Y5F7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGC4Q9Y5F7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PCDHGC4Q9Y5F7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PCDHGC4Q9Y5F7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHGC4Q9Y5F7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHGC4Q9Y5F7 AL117332.1-201ENST00000622628 974 ntBASIC22.98■■□□□ 1.27
PCDHGC4Q9Y5F7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGC4Q9Y5F7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGC4Q9Y5F7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHGC4Q9Y5F7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC4Q9Y5F7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC4Q9Y5F7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC4Q9Y5F7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHGC4Q9Y5F7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDHGC4Q9Y5F7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHGC4Q9Y5F7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC4Q9Y5F7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHGC4Q9Y5F7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 MIR3621-201ENST00000580529 85 ntBASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 AL356740.2-201ENST00000601559 647 ntBASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
PCDHGC4Q9Y5F7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms