Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 DUX4L11-201ENST00000611504 1267 ntBASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 DUX4L12-201ENST00000614593 1267 ntBASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 DUX4L14-201ENST00000621227 1267 ntBASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
LRCH1Q9Y2L9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.59■■□□□ 1.05
LRCH1Q9Y2L9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRCH1Q9Y2L9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.58■■□□□ 1.05
LRCH1Q9Y2L9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRCH1Q9Y2L9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRCH1Q9Y2L9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
LRCH1Q9Y2L9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.58■■□□□ 1.05
LRCH1Q9Y2L9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.58■■□□□ 1.05
LRCH1Q9Y2L9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRCH1Q9Y2L9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.58■■□□□ 1.04
LRCH1Q9Y2L9 HLA-L-211ENST00000482052 1765 ntBASIC21.58■■□□□ 1.04
LRCH1Q9Y2L9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRCH1Q9Y2L9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
LRCH1Q9Y2L9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LRCH1Q9Y2L9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.58■■□□□ 1.04
LRCH1Q9Y2L9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.58■■□□□ 1.04
LRCH1Q9Y2L9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRCH1Q9Y2L9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRCH1Q9Y2L9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH1Q9Y2L9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.54■■□□□ 1.04
LRCH1Q9Y2L9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LRCH1Q9Y2L9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH1Q9Y2L9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH1Q9Y2L9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LRCH1Q9Y2L9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.54■■□□□ 1.04
LRCH1Q9Y2L9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LRCH1Q9Y2L9 RNF165-205ENST00000588679 2904 ntBASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 MIR3648-2-201ENST00000581792 180 ntBASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 MIR3648-1-201ENST00000615959 180 ntBASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.52■■□□□ 1.04
LRCH1Q9Y2L9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms