Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.14■■□□□ 1.78
RNF146Q9NTX7 AF213884.3-201ENST00000563833 479 ntBASIC26.14■■□□□ 1.78
RNF146Q9NTX7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RNF146Q9NTX7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RNF146Q9NTX7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.14■■□□□ 1.77
RNF146Q9NTX7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.13■■□□□ 1.77
RNF146Q9NTX7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF146Q9NTX7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF146Q9NTX7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RNF146Q9NTX7 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.13■■□□□ 1.77
RNF146Q9NTX7 MIR4767-201ENST00000582827 78 ntBASIC26.13■■□□□ 1.77
RNF146Q9NTX7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.13■■□□□ 1.77
RNF146Q9NTX7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF146Q9NTX7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF146Q9NTX7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
RNF146Q9NTX7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF146Q9NTX7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RNF146Q9NTX7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.11■■□□□ 1.77
RNF146Q9NTX7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.11■■□□□ 1.77
RNF146Q9NTX7 AP001330.3-201ENST00000520123 633 ntBASIC26.11■■□□□ 1.77
RNF146Q9NTX7 AL136967.2-201ENST00000623968 743 ntBASIC26.11■■□□□ 1.77
RNF146Q9NTX7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF146Q9NTX7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF146Q9NTX7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
RNF146Q9NTX7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 MIR939-201ENST00000401314 82 ntBASIC26.1■■□□□ 1.77
RNF146Q9NTX7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF146Q9NTX7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.09■■□□□ 1.77
RNF146Q9NTX7 ALDH1A3-203ENST00000557963 1670 ntBASIC26.09■■□□□ 1.77
RNF146Q9NTX7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF146Q9NTX7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF146Q9NTX7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.09■■□□□ 1.77
RNF146Q9NTX7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
RNF146Q9NTX7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
RNF146Q9NTX7 AP003733.4-201ENST00000623785 1697 ntBASIC26.09■■□□□ 1.77
RNF146Q9NTX7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF146Q9NTX7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF146Q9NTX7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.08■■□□□ 1.77
RNF146Q9NTX7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
RNF146Q9NTX7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF146Q9NTX7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF146Q9NTX7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
RNF146Q9NTX7 AC135731.1-201ENST00000569415 2548 ntBASIC26.08■■□□□ 1.76
RNF146Q9NTX7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
RNF146Q9NTX7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 AC006455.2-201ENST00000429931 906 ntBASIC26.07■■□□□ 1.76
RNF146Q9NTX7 AC241377.3-202ENST00000626088 1088 ntBASIC26.07■■□□□ 1.76
RNF146Q9NTX7 AC241585.3-202ENST00000628937 1088 ntBASIC26.07■■□□□ 1.76
RNF146Q9NTX7 AC245100.8-202ENST00000629247 1058 ntBASIC26.07■■□□□ 1.76
RNF146Q9NTX7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.07■■□□□ 1.76
RNF146Q9NTX7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RNF146Q9NTX7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
RNF146Q9NTX7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF146Q9NTX7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.06■■□□□ 1.76
RNF146Q9NTX7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.06■■□□□ 1.76
RNF146Q9NTX7 AC105265.2-201ENST00000467189 838 ntBASIC26.06■■□□□ 1.76
RNF146Q9NTX7 AL138724.1-201ENST00000606771 1088 ntBASIC26.06■■□□□ 1.76
RNF146Q9NTX7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.06■■□□□ 1.76
RNF146Q9NTX7 AC011298.3-201ENST00000615796 283 ntBASIC26.06■■□□□ 1.76
RNF146Q9NTX7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF146Q9NTX7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.05■■□□□ 1.76
RNF146Q9NTX7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF146Q9NTX7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RNF146Q9NTX7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF146Q9NTX7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
RNF146Q9NTX7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.04■■□□□ 1.76
RNF146Q9NTX7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.04■■□□□ 1.76
RNF146Q9NTX7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF146Q9NTX7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms