Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 AC010997.5-201ENST00000609182 354 ntBASIC20.78■□□□□ 0.92
PCNX3Q9H6A9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX3Q9H6A9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCNX3Q9H6A9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX3Q9H6A9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX3Q9H6A9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.77■□□□□ 0.92
PCNX3Q9H6A9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.77■□□□□ 0.92
PCNX3Q9H6A9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.77■□□□□ 0.92
PCNX3Q9H6A9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX3Q9H6A9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCNX3Q9H6A9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCNX3Q9H6A9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
PCNX3Q9H6A9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCNX3Q9H6A9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
PCNX3Q9H6A9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.77■□□□□ 0.91
PCNX3Q9H6A9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 TSPY9P-201ENST00000440215 945 ntBASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 TSPY11P-201ENST00000442607 1045 ntBASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PCNX3Q9H6A9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.75■□□□□ 0.91
PCNX3Q9H6A9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.74■□□□□ 0.91
PCNX3Q9H6A9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCNX3Q9H6A9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 AL512631.2-201ENST00000604634 923 ntBASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCNX3Q9H6A9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCNX3Q9H6A9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 MIR4466-201ENST00000606121 54 ntBASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 MIR6722-201ENST00000617286 78 ntBASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 AC005703.6-201ENST00000623265 1329 ntBASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCNX3Q9H6A9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 AL356441.2-201ENST00000443009 864 ntBASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 MIR3621-201ENST00000580529 85 ntBASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms