Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC4Q9H5U6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC4Q9H5U6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZCCHC4Q9H5U6 RNF126P1-201ENST00000567452 1320 ntBASIC19.99■□□□□ 0.79
ZCCHC4Q9H5U6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZCCHC4Q9H5U6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 RPS2P7-201ENST00000447334 885 ntBASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 AC018755.3-202ENST00000596210 929 ntBASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 C1orf229-201ENST00000623686 2258 ntBASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 AC137767.1-201ENST00000602918 1920 ntBASIC19.98■□□□□ 0.79
ZCCHC4Q9H5U6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC4Q9H5U6 ECEL1P1-201ENST00000373592 1742 ntBASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ZCCHC4Q9H5U6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC4Q9H5U6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 GUSBP5-202ENST00000510805 1989 ntBASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
ZCCHC4Q9H5U6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 AC090877.2-201ENST00000558441 1738 ntBASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 AL592293.1-201ENST00000502889 1188 ntBASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.93■□□□□ 0.78
ZCCHC4Q9H5U6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ZCCHC4Q9H5U6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC4Q9H5U6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC4Q9H5U6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.92■□□□□ 0.78
ZCCHC4Q9H5U6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ZCCHC4Q9H5U6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ZCCHC4Q9H5U6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
ZCCHC4Q9H5U6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC4Q9H5U6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms