Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.23■□□□□ 0.67
GSX1Q9H4S2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.23■□□□□ 0.67
GSX1Q9H4S2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
GSX1Q9H4S2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GSX1Q9H4S2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L2-201ENST00000561772 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L6-201ENST00000626483 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L1-201ENST00000627662 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L8-201ENST00000629013 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L3-201ENST00000630187 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L7-201ENST00000630678 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L5-201ENST00000630834 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 AC145676.1-201ENST00000514988 2004 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 AC092803.2-201ENST00000564287 1899 ntBASIC19.21■□□□□ 0.67
GSX1Q9H4S2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 AC099791.2-201ENST00000605725 427 ntBASIC19.2■□□□□ 0.66
GSX1Q9H4S2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.17■□□□□ 0.66
GSX1Q9H4S2 YBX1P1-201ENST00000445822 960 ntBASIC19.17■□□□□ 0.66
GSX1Q9H4S2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.16■□□□□ 0.66
GSX1Q9H4S2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 AC011298.3-201ENST00000615796 283 ntBASIC19.16■□□□□ 0.66
GSX1Q9H4S2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms