Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.23■□□□□ 0.67
GSX1Q9H4S2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.23■□□□□ 0.67
GSX1Q9H4S2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
GSX1Q9H4S2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GSX1Q9H4S2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L2-201ENST00000561772 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L6-201ENST00000626483 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L1-201ENST00000627662 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L8-201ENST00000629013 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L3-201ENST00000630187 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L7-201ENST00000630678 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 DUX4L5-201ENST00000630834 1275 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSX1Q9H4S2 AC145676.1-201ENST00000514988 2004 ntBASIC19.22■□□□□ 0.67
GSX1Q9H4S2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 AC092803.2-201ENST00000564287 1899 ntBASIC19.21■□□□□ 0.67
GSX1Q9H4S2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSX1Q9H4S2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 AC099791.2-201ENST00000605725 427 ntBASIC19.2■□□□□ 0.66
GSX1Q9H4S2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GSX1Q9H4S2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
GSX1Q9H4S2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GSX1Q9H4S2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.17■□□□□ 0.66
GSX1Q9H4S2 YBX1P1-201ENST00000445822 960 ntBASIC19.17■□□□□ 0.66
GSX1Q9H4S2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.17■□□□□ 0.66
GSX1Q9H4S2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.16■□□□□ 0.66
GSX1Q9H4S2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 AC011298.3-201ENST00000615796 283 ntBASIC19.16■□□□□ 0.66
GSX1Q9H4S2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GSX1Q9H4S2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms