Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK3BQ9BT76 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK3BQ9BT76 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK3BQ9BT76 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK3BQ9BT76 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
UPK3BQ9BT76 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 AP003733.4-201ENST00000623785 1697 ntBASIC15.74■□□□□ 0.11
UPK3BQ9BT76 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 AC131281.2-201ENST00000520478 145 ntBASIC15.74■□□□□ 0.11
UPK3BQ9BT76 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UPK3BQ9BT76 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 AC005703.6-201ENST00000623265 1329 ntBASIC15.73■□□□□ 0.11
UPK3BQ9BT76 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK3BQ9BT76 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UPK3BQ9BT76 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 CLDN5-201ENST00000403084 2357 ntBASIC15.71■□□□□ 0.11
UPK3BQ9BT76 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
UPK3BQ9BT76 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UPK3BQ9BT76 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
UPK3BQ9BT76 AC022211.4-201ENST00000625094 2161 ntBASIC15.7■□□□□ 0.1
UPK3BQ9BT76 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UPK3BQ9BT76 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK3BQ9BT76 AL136116.3-201ENST00000402907 1138 ntBASIC15.69■□□□□ 0.1
UPK3BQ9BT76 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.69■□□□□ 0.1
UPK3BQ9BT76 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK3BQ9BT76 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.69■□□□□ 0.1
UPK3BQ9BT76 AL512631.2-201ENST00000604634 923 ntBASIC15.69■□□□□ 0.1
UPK3BQ9BT76 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK3BQ9BT76 HLA-L-211ENST00000482052 1765 ntBASIC15.69■□□□□ 0.1
UPK3BQ9BT76 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK3BQ9BT76 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UPK3BQ9BT76 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.69■□□□□ 0.1
UPK3BQ9BT76 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 AC142381.3-201ENST00000568208 1670 ntBASIC15.68■□□□□ 0.1
UPK3BQ9BT76 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK3BQ9BT76 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.67■□□□□ 0.1
UPK3BQ9BT76 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UPK3BQ9BT76 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK3BQ9BT76 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK3BQ9BT76 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms