Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDHR1Q96JP9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.71■■□□□ 1.71
CDHR1Q96JP9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.71■■□□□ 1.71
CDHR1Q96JP9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.71■■□□□ 1.71
CDHR1Q96JP9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDHR1Q96JP9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.71■■□□□ 1.71
CDHR1Q96JP9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CDHR1Q96JP9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
CDHR1Q96JP9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDHR1Q96JP9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
CDHR1Q96JP9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDHR1Q96JP9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.69■■□□□ 1.7
CDHR1Q96JP9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDHR1Q96JP9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDHR1Q96JP9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDHR1Q96JP9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.69■■□□□ 1.7
CDHR1Q96JP9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDHR1Q96JP9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CDHR1Q96JP9 AC135731.1-201ENST00000569415 2548 ntBASIC25.68■■□□□ 1.7
CDHR1Q96JP9 UNC93B3-201ENST00000308076 687 ntBASIC25.68■■□□□ 1.7
CDHR1Q96JP9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDHR1Q96JP9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
CDHR1Q96JP9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CDHR1Q96JP9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.67■■□□□ 1.7
CDHR1Q96JP9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 AC106739.1-201ENST00000617035 715 ntBASIC25.67■■□□□ 1.7
CDHR1Q96JP9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDHR1Q96JP9 C17orf82-201ENST00000623772 1530 ntBASIC25.67■■□□□ 1.7
CDHR1Q96JP9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDHR1Q96JP9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.66■■□□□ 1.7
CDHR1Q96JP9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDHR1Q96JP9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CDHR1Q96JP9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDHR1Q96JP9 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.66■■□□□ 1.7
CDHR1Q96JP9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDHR1Q96JP9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.66■■□□□ 1.7
CDHR1Q96JP9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 PBX2P1-201ENST00000493219 1291 ntBASIC25.65■■□□□ 1.7
CDHR1Q96JP9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDHR1Q96JP9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDHR1Q96JP9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.64■■□□□ 1.7
CDHR1Q96JP9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDHR1Q96JP9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.64■■□□□ 1.7
CDHR1Q96JP9 AL136162.1-201ENST00000607711 1078 ntBASIC25.64■■□□□ 1.7
CDHR1Q96JP9 AC241377.3-202ENST00000626088 1088 ntBASIC25.64■■□□□ 1.7
CDHR1Q96JP9 AC241585.3-202ENST00000628937 1088 ntBASIC25.64■■□□□ 1.7
CDHR1Q96JP9 AC245100.8-202ENST00000629247 1058 ntBASIC25.64■■□□□ 1.7
CDHR1Q96JP9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CDHR1Q96JP9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDHR1Q96JP9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDHR1Q96JP9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDHR1Q96JP9 AC005837.3-201ENST00000612163 286 ntBASIC25.63■■□□□ 1.69
CDHR1Q96JP9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDHR1Q96JP9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.63■■□□□ 1.69
CDHR1Q96JP9 AC135279.3-201ENST00000610945 1311 ntBASIC25.63■■□□□ 1.69
CDHR1Q96JP9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDHR1Q96JP9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDHR1Q96JP9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.62■■□□□ 1.69
CDHR1Q96JP9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.62■■□□□ 1.69
CDHR1Q96JP9 SYT6-210ENST00000641643 1587 ntBASIC25.62■■□□□ 1.69
CDHR1Q96JP9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDHR1Q96JP9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDHR1Q96JP9 AC141586.4-201ENST00000624558 1573 ntBASIC25.61■■□□□ 1.69
CDHR1Q96JP9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.6■■□□□ 1.69
CDHR1Q96JP9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.6■■□□□ 1.69
CDHR1Q96JP9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CDHR1Q96JP9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.6■■□□□ 1.69
CDHR1Q96JP9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDHR1Q96JP9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.6■■□□□ 1.69
CDHR1Q96JP9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDHR1Q96JP9 AC099791.2-201ENST00000605725 427 ntBASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms