Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HPS1Q92902 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HPS1Q92902 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.57■□□□□ 0.88
HPS1Q92902 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HPS1Q92902 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.56■□□□□ 0.88
HPS1Q92902 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HPS1Q92902 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.56■□□□□ 0.88
HPS1Q92902 AC074183.2-201ENST00000623112 922 ntBASIC20.56■□□□□ 0.88
HPS1Q92902 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.56■□□□□ 0.88
HPS1Q92902 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS1Q92902 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS1Q92902 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.56■□□□□ 0.88
HPS1Q92902 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HPS1Q92902 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS1Q92902 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS1Q92902 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS1Q92902 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS1Q92902 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS1Q92902 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HPS1Q92902 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS1Q92902 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS1Q92902 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS1Q92902 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HPS1Q92902 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS1Q92902 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
HPS1Q92902 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HPS1Q92902 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.54■□□□□ 0.88
HPS1Q92902 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS1Q92902 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS1Q92902 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS1Q92902 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS1Q92902 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS1Q92902 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HPS1Q92902 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS1Q92902 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.53■□□□□ 0.88
HPS1Q92902 AP003733.4-201ENST00000623785 1697 ntBASIC20.53■□□□□ 0.88
HPS1Q92902 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HPS1Q92902 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS1Q92902 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HPS1Q92902 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS1Q92902 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS1Q92902 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS1Q92902 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS1Q92902 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS1Q92902 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS1Q92902 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HPS1Q92902 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
HPS1Q92902 DUX4L9-201ENST00000449051 1259 ntBASIC20.52■□□□□ 0.88
HPS1Q92902 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.52■□□□□ 0.88
HPS1Q92902 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS1Q92902 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS1Q92902 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS1Q92902 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS1Q92902 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS1Q92902 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS1Q92902 AL137060.1-201ENST00000618151 2648 ntBASIC20.52■□□□□ 0.87
HPS1Q92902 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
HPS1Q92902 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HPS1Q92902 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS1Q92902 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
HPS1Q92902 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
HPS1Q92902 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS1Q92902 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HPS1Q92902 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HPS1Q92902 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS1Q92902 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS1Q92902 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HPS1Q92902 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.51■□□□□ 0.87
HPS1Q92902 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS1Q92902 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS1Q92902 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HPS1Q92902 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HPS1Q92902 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS1Q92902 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HPS1Q92902 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS1Q92902 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS1Q92902 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS1Q92902 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
HPS1Q92902 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS1Q92902 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.5■□□□□ 0.87
HPS1Q92902 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.5■□□□□ 0.87
HPS1Q92902 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HPS1Q92902 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS1Q92902 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
HPS1Q92902 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS1Q92902 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS1Q92902 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS1Q92902 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.49■□□□□ 0.87
HPS1Q92902 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.49■□□□□ 0.87
HPS1Q92902 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HPS1Q92902 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.49■□□□□ 0.87
HPS1Q92902 BHLHE23-202ENST00000612929 1109 ntBASIC20.49■□□□□ 0.87
HPS1Q92902 MIR6765-201ENST00000614092 87 ntBASIC20.49■□□□□ 0.87
HPS1Q92902 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS1Q92902 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS1Q92902 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS1Q92902 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS1Q92902 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS1Q92902 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
HPS1Q92902 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms