Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 AC139795.1-202ENST00000500444 432 ntBASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 AC012354.3-201ENST00000623734 483 ntBASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4IP1Q8WWV3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RTN4IP1Q8WWV3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 AC233723.2-201ENST00000623798 2106 ntBASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 LONRF2P2-201ENST00000439212 571 ntBASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4IP1Q8WWV3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4IP1Q8WWV3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.04■□□□□ 0.64
RTN4IP1Q8WWV3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 BHLHE23-202ENST00000612929 1109 ntBASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4IP1Q8WWV3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTN4IP1Q8WWV3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTN4IP1Q8WWV3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RTN4IP1Q8WWV3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTN4IP1Q8WWV3 AL592295.1-201ENST00000400984 884 ntBASIC19.02■□□□□ 0.64
RTN4IP1Q8WWV3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.02■□□□□ 0.64
RTN4IP1Q8WWV3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.02■□□□□ 0.64
RTN4IP1Q8WWV3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTN4IP1Q8WWV3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
RTN4IP1Q8WWV3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN4IP1Q8WWV3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.01■□□□□ 0.63
RTN4IP1Q8WWV3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN4IP1Q8WWV3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN4IP1Q8WWV3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN4IP1Q8WWV3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.01■□□□□ 0.63
RTN4IP1Q8WWV3 AC019171.1-201ENST00000601251 1056 ntBASIC19.01■□□□□ 0.63
RTN4IP1Q8WWV3 ANOS2P-203ENST00000472227 1816 ntBASIC19.01■□□□□ 0.63
RTN4IP1Q8WWV3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 423.9 ms