Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC36.09■■■■□ 3.37
CFAP43Q8NDM7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
CFAP43Q8NDM7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC36.09■■■■□ 3.37
CFAP43Q8NDM7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC36.09■■■■□ 3.37
CFAP43Q8NDM7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 AL031602.1-201ENST00000633169 911 ntBASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC36.08■■■■□ 3.37
CFAP43Q8NDM7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
CFAP43Q8NDM7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC36.07■■■■□ 3.37
CFAP43Q8NDM7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC36.07■■■■□ 3.37
CFAP43Q8NDM7 AC022517.1-201ENST00000592429 346 ntBASIC36.07■■■■□ 3.37
CFAP43Q8NDM7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC36.07■■■■□ 3.37
CFAP43Q8NDM7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC36.07■■■■□ 3.37
CFAP43Q8NDM7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
CFAP43Q8NDM7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC36.07■■■■□ 3.36
CFAP43Q8NDM7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
CFAP43Q8NDM7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC36.07■■■■□ 3.36
CFAP43Q8NDM7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
CFAP43Q8NDM7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC36.07■■■■□ 3.36
CFAP43Q8NDM7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC36.07■■■■□ 3.36
CFAP43Q8NDM7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
CFAP43Q8NDM7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
CFAP43Q8NDM7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
CFAP43Q8NDM7 AC008764.7-201ENST00000593779 1081 ntBASIC36.06■■■■□ 3.36
CFAP43Q8NDM7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
CFAP43Q8NDM7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC36.06■■■■□ 3.36
CFAP43Q8NDM7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 AC005703.6-201ENST00000623265 1329 ntBASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CFAP43Q8NDM7 AK1-201ENST00000223836 736 ntTSL 3 BASIC36.04■■■■□ 3.36
CFAP43Q8NDM7 SLC47A1P1-202ENST00000449666 945 ntBASIC36.04■■■■□ 3.36
CFAP43Q8NDM7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC36.03■■■■□ 3.36
CFAP43Q8NDM7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC36.03■■■■□ 3.36
CFAP43Q8NDM7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.36
CFAP43Q8NDM7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC36.03■■■■□ 3.36
CFAP43Q8NDM7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC36.03■■■■□ 3.36
CFAP43Q8NDM7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC36.03■■■■□ 3.36
CFAP43Q8NDM7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
CFAP43Q8NDM7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
CFAP43Q8NDM7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
CFAP43Q8NDM7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC36.02■■■■□ 3.36
CFAP43Q8NDM7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
CFAP43Q8NDM7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC36.02■■■■□ 3.36
CFAP43Q8NDM7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC36.02■■■■□ 3.36
CFAP43Q8NDM7 ID1-201ENST00000376105 1233 ntBASIC36.01■■■■□ 3.36
CFAP43Q8NDM7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC36.01■■■■□ 3.36
CFAP43Q8NDM7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC36.01■■■■□ 3.35
CFAP43Q8NDM7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC36.01■■■■□ 3.35
CFAP43Q8NDM7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC36■■■■□ 3.35
CFAP43Q8NDM7 AC136469.2-201ENST00000623944 1028 ntBASIC36■■■■□ 3.35
CFAP43Q8NDM7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC36■■■■□ 3.35
CFAP43Q8NDM7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
CFAP43Q8NDM7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC36■■■■□ 3.35
CFAP43Q8NDM7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC36■■■■□ 3.35
CFAP43Q8NDM7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC36■■■■□ 3.35
CFAP43Q8NDM7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC35.99■■■■□ 3.35
CFAP43Q8NDM7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CFAP43Q8NDM7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC35.99■■■■□ 3.35
CFAP43Q8NDM7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC35.99■■■■□ 3.35
CFAP43Q8NDM7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC35.99■■■■□ 3.35
CFAP43Q8NDM7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC35.99■■■■□ 3.35
CFAP43Q8NDM7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 DUX4L2-201ENST00000561772 1275 ntBASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 DUX4L6-201ENST00000626483 1275 ntBASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 DUX4L1-201ENST00000627662 1275 ntBASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 DUX4L8-201ENST00000629013 1275 ntBASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 DUX4L3-201ENST00000630187 1275 ntBASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 DUX4L7-201ENST00000630678 1275 ntBASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 DUX4L5-201ENST00000630834 1275 ntBASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC35.98■■■■□ 3.35
CFAP43Q8NDM7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CFAP43Q8NDM7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CFAP43Q8NDM7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC35.97■■■■□ 3.35
CFAP43Q8NDM7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC35.97■■■■□ 3.35
CFAP43Q8NDM7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC35.97■■■■□ 3.35
CFAP43Q8NDM7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC35.97■■■■□ 3.35
CFAP43Q8NDM7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CFAP43Q8NDM7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CFAP43Q8NDM7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CFAP43Q8NDM7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CFAP43Q8NDM7 AC099791.2-201ENST00000605725 427 ntBASIC35.96■■■■□ 3.35
CFAP43Q8NDM7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms