Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LINC00311Q8N616 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.52■□□□□ 0.56
LINC00311Q8N616 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.52■□□□□ 0.56
LINC00311Q8N616 AC092028.1-203ENST00000608262 953 ntBASIC18.52■□□□□ 0.56
LINC00311Q8N616 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC00311Q8N616 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.52■□□□□ 0.55
LINC00311Q8N616 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.52■□□□□ 0.55
LINC00311Q8N616 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LINC00311Q8N616 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC00311Q8N616 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.52■□□□□ 0.55
LINC00311Q8N616 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00311Q8N616 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00311Q8N616 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00311Q8N616 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00311Q8N616 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00311Q8N616 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00311Q8N616 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00311Q8N616 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00311Q8N616 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00311Q8N616 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LINC00311Q8N616 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00311Q8N616 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC00311Q8N616 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
LINC00311Q8N616 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00311Q8N616 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00311Q8N616 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC00311Q8N616 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00311Q8N616 MIR4787-201ENST00000607364 84 ntBASIC18.5■□□□□ 0.55
LINC00311Q8N616 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC00311Q8N616 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.5■□□□□ 0.55
LINC00311Q8N616 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00311Q8N616 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00311Q8N616 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00311Q8N616 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.49■□□□□ 0.55
LINC00311Q8N616 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC00311Q8N616 AC239859.2-201ENST00000444165 318 ntBASIC18.49■□□□□ 0.55
LINC00311Q8N616 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00311Q8N616 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00311Q8N616 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00311Q8N616 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00311Q8N616 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00311Q8N616 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00311Q8N616 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.48■□□□□ 0.55
LINC00311Q8N616 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.48■□□□□ 0.55
LINC00311Q8N616 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00311Q8N616 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC00311Q8N616 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00311Q8N616 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC00311Q8N616 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.48■□□□□ 0.55
LINC00311Q8N616 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LINC00311Q8N616 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LINC00311Q8N616 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.48■□□□□ 0.55
LINC00311Q8N616 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LINC00311Q8N616 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
LINC00311Q8N616 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.47■□□□□ 0.55
LINC00311Q8N616 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LINC00311Q8N616 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LINC00311Q8N616 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00311Q8N616 AC092068.2-201ENST00000590491 1708 ntBASIC18.46■□□□□ 0.55
LINC00311Q8N616 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00311Q8N616 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.46■□□□□ 0.55
LINC00311Q8N616 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.46■□□□□ 0.55
LINC00311Q8N616 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00311Q8N616 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.46■□□□□ 0.55
LINC00311Q8N616 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LINC00311Q8N616 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00311Q8N616 AC005703.6-201ENST00000623265 1329 ntBASIC18.46■□□□□ 0.55
LINC00311Q8N616 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC00311Q8N616 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
LINC00311Q8N616 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00311Q8N616 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LINC00311Q8N616 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00311Q8N616 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00311Q8N616 ANOS2P-203ENST00000472227 1816 ntBASIC18.45■□□□□ 0.54
LINC00311Q8N616 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00311Q8N616 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LINC00311Q8N616 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00311Q8N616 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.45■□□□□ 0.54
LINC00311Q8N616 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LINC00311Q8N616 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
LINC00311Q8N616 DUSP8P5-201ENST00000422884 1815 ntBASIC18.44■□□□□ 0.54
LINC00311Q8N616 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.44■□□□□ 0.54
LINC00311Q8N616 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00311Q8N616 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms