Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.62■■□□□ 1.21
TRAM1L1Q8N609 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.61■■□□□ 1.21
TRAM1L1Q8N609 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRAM1L1Q8N609 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRAM1L1Q8N609 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TRAM1L1Q8N609 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAM1L1Q8N609 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAM1L1Q8N609 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAM1L1Q8N609 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRAM1L1Q8N609 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAM1L1Q8N609 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAM1L1Q8N609 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAM1L1Q8N609 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.58■■□□□ 1.21
TRAM1L1Q8N609 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.58■■□□□ 1.21
TRAM1L1Q8N609 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.58■■□□□ 1.21
TRAM1L1Q8N609 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.57■■□□□ 1.2
TRAM1L1Q8N609 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.57■■□□□ 1.2
TRAM1L1Q8N609 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.57■■□□□ 1.2
TRAM1L1Q8N609 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
TRAM1L1Q8N609 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TRAM1L1Q8N609 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAM1L1Q8N609 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TRAM1L1Q8N609 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAM1L1Q8N609 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.56■■□□□ 1.2
TRAM1L1Q8N609 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRAM1L1Q8N609 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.55■■□□□ 1.2
TRAM1L1Q8N609 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.55■■□□□ 1.2
TRAM1L1Q8N609 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRAM1L1Q8N609 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAM1L1Q8N609 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAM1L1Q8N609 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TRAM1L1Q8N609 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAM1L1Q8N609 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAM1L1Q8N609 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.54■■□□□ 1.2
TRAM1L1Q8N609 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.54■■□□□ 1.2
TRAM1L1Q8N609 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.54■■□□□ 1.2
TRAM1L1Q8N609 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRAM1L1Q8N609 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 ABCB10P4-201ENST00000566803 2184 ntBASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAM1L1Q8N609 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 AC093323.1-202ENST00000635031 2045 ntBASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAM1L1Q8N609 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
TRAM1L1Q8N609 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRAM1L1Q8N609 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms