Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SYNPOQ8N3V7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SYNPOQ8N3V7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SYNPOQ8N3V7 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.25■■□□□ 1.31
SYNPOQ8N3V7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SYNPOQ8N3V7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SYNPOQ8N3V7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 AC233992.3-201ENST00000607491 485 ntBASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SYNPOQ8N3V7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SYNPOQ8N3V7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.23■■□□□ 1.31
SYNPOQ8N3V7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYNPOQ8N3V7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYNPOQ8N3V7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SYNPOQ8N3V7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.23■■□□□ 1.31
SYNPOQ8N3V7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYNPOQ8N3V7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 DUSP8P4-201ENST00000399538 1761 ntBASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 AC092803.2-201ENST00000564287 1899 ntBASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 BX842568.3-201ENST00000418104 571 ntBASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SYNPOQ8N3V7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYNPOQ8N3V7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYNPOQ8N3V7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SYNPOQ8N3V7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.21■■□□□ 1.31
SYNPOQ8N3V7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SYNPOQ8N3V7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYNPOQ8N3V7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYNPOQ8N3V7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYNPOQ8N3V7 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.2■■□□□ 1.3
SYNPOQ8N3V7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.2■■□□□ 1.3
SYNPOQ8N3V7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYNPOQ8N3V7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYNPOQ8N3V7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYNPOQ8N3V7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SYNPOQ8N3V7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNPOQ8N3V7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.19■■□□□ 1.3
SYNPOQ8N3V7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.19■■□□□ 1.3
SYNPOQ8N3V7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SYNPOQ8N3V7 MIR6089-201ENST00000616698 64 ntBASIC23.19■■□□□ 1.3
SYNPOQ8N3V7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNPOQ8N3V7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNPOQ8N3V7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNPOQ8N3V7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYNPOQ8N3V7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SYNPOQ8N3V7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYNPOQ8N3V7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.18■■□□□ 1.3
SYNPOQ8N3V7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYNPOQ8N3V7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYNPOQ8N3V7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SYNPOQ8N3V7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYNPOQ8N3V7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 AC020928.2-201ENST00000588717 2197 ntBASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.17■■□□□ 1.3
SYNPOQ8N3V7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SYNPOQ8N3V7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SYNPOQ8N3V7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.16■■□□□ 1.3
SYNPOQ8N3V7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
SYNPOQ8N3V7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.16■■□□□ 1.3
SYNPOQ8N3V7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.16■■□□□ 1.3
SYNPOQ8N3V7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYNPOQ8N3V7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SYNPOQ8N3V7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms