Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.21■■□□□ 1.31
CHPFQ8IZ52 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHPFQ8IZ52 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CHPFQ8IZ52 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHPFQ8IZ52 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CHPFQ8IZ52 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHPFQ8IZ52 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHPFQ8IZ52 AC009102.2-201ENST00000606772 1639 ntBASIC23.2■■□□□ 1.3
CHPFQ8IZ52 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHPFQ8IZ52 AC099791.2-201ENST00000605725 427 ntBASIC23.2■■□□□ 1.3
CHPFQ8IZ52 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CHPFQ8IZ52 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHPFQ8IZ52 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHPFQ8IZ52 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.19■■□□□ 1.3
CHPFQ8IZ52 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 AF213884.3-201ENST00000563833 479 ntBASIC23.18■■□□□ 1.3
CHPFQ8IZ52 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHPFQ8IZ52 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHPFQ8IZ52 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 SERBP1P1-201ENST00000396021 1160 ntBASIC23.16■■□□□ 1.3
CHPFQ8IZ52 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 MIR4767-201ENST00000582827 78 ntBASIC23.16■■□□□ 1.3
CHPFQ8IZ52 AL136967.2-201ENST00000623968 743 ntBASIC23.16■■□□□ 1.3
CHPFQ8IZ52 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CHPFQ8IZ52 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 HLA-L-211ENST00000482052 1765 ntBASIC23.15■■□□□ 1.3
CHPFQ8IZ52 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CHPFQ8IZ52 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHPFQ8IZ52 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.14■■□□□ 1.3
CHPFQ8IZ52 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHPFQ8IZ52 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.29
CHPFQ8IZ52 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHPFQ8IZ52 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHPFQ8IZ52 MIR939-201ENST00000401314 82 ntBASIC23.14■■□□□ 1.29
CHPFQ8IZ52 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.14■■□□□ 1.29
CHPFQ8IZ52 AC105265.2-201ENST00000467189 838 ntBASIC23.14■■□□□ 1.29
CHPFQ8IZ52 AP001330.3-201ENST00000520123 633 ntBASIC23.14■■□□□ 1.29
CHPFQ8IZ52 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.14■■□□□ 1.29
CHPFQ8IZ52 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.13■■□□□ 1.29
CHPFQ8IZ52 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHPFQ8IZ52 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHPFQ8IZ52 RARRES2P6-201ENST00000567333 442 ntBASIC23.13■■□□□ 1.29
CHPFQ8IZ52 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.13■■□□□ 1.29
CHPFQ8IZ52 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHPFQ8IZ52 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHPFQ8IZ52 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHPFQ8IZ52 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms